RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 A0A0G2JLM5 398 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 H3BUA1 57 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 BRI3O95415 125 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 LYL1P12980 280 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 ZP3P21754 424 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 DTYMKP23919 212 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 MYL9P24844 172 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 FGF9P31371 208 aaPredicted RBP6.09□□□□□ -1.43
USP48-207ENST00000471752 ATP5G2Q06055 141 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 EXOSC2Q13868 293 aaKnown RBP6.09□□□□□ -1.43
USP48-207ENST00000471752 RTL8BQ17RB0 113 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 DEFB114Q30KQ6 69 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 VMA21Q3ZAQ7 101 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 SFXN4Q6P4A7 337 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 LINC00322Q6ZN03 302 aaPredicted RBP6.09□□□□□ -1.43
USP48-207ENST00000471752 PUSL1Q8N0Z8 303 aaKnown RBP6.09□□□□□ -1.43
USP48-207ENST00000471752 ZNF645Q8N7E2 425 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 SNAPC3Q92966 411 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 CCDC140Q96MF4 163 aa6.09□□□□□ -1.43
USP48-207ENST00000471752 FYTTD1Q96QD9 318 aaKnown RBP6.09□□□□□ -1.43
USP48-207ENST00000471752 IGHV3-21A0A0B4J1V1 117 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 IGHV3-35A0A0C4DH35 117 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 LOC100506127A0A0U1RQW1 187 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 METTL21EPA6NDL7 271 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 MFSD2BA6NFX1 497 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 A8MZ25 164 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 SULT1C2O00338 296 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 MPPED1O15442 326 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 CD40LGP29965 261 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 FCGR2CP31995 323 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 HSPA13P48723 471 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 CDK10Q15131 360 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 RPEL1Q2QD12 228 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 C15orf32Q32M92 178 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 IDNKQ5T6J7 187 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 CNIH2Q6PI25 160 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 CLEC19AQ6UXS0 136 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 KCTD9Q7L273 389 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 OR10W1Q8NGF6 305 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 OSR1Q8TAX0 266 aaPredicted RBP6.08□□□□□ -1.44
USP48-207ENST00000471752 SECTM1Q8WVN6 248 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 TCTEX1D2Q8WW35 142 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 WDR89Q96FK6 387 aaPredicted RBP6.08□□□□□ -1.44
USP48-207ENST00000471752 ZNF414Q96IQ9 312 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 USMG5Q96IX5 58 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 RHBDL2Q9NX52 303 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 ANXA10Q9UJ72 324 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 FBXL7Q9UJT9 491 aa6.08□□□□□ -1.44
USP48-207ENST00000471752 DNAH2Q9P225 4427 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 C2orf70A6NJV1 201 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 OR2A4O95047 310 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 DIRAS3O95661 229 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 ZNF735P0CB33 412 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 RRASP10301 218 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 FOLR2P14207 255 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 MFAP2P55001 183 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 GNG2P59768 71 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 GABARAPL2P60520 117 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 EWSR1Q01844 656 aaKnown RBP eCLIP6.07□□□□□ -1.44
USP48-207ENST00000471752 NEDD8Q15843 81 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 TM4SF20Q53R12 229 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 OR4A47Q6IF82 309 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 UNQ9165/PRO28630Q6UXU0 137 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 ZNF818PQ6ZRF7 136 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 HOGA1Q86XE5 327 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 MMD2Q8IY49 270 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 BEST4Q8NFU0 473 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 TMEM167AQ8TBQ9 72 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 ADTRPQ96IZ2 230 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 TMEM68Q96MH6 324 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 OR2A7Q96R45 310 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 DCSTAMPQ9H295 470 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 HIPK2Q9H2X6 1198 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 AUNIPQ9H7T9 357 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 ZMAT4Q9H898 229 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 MLXQ9UH92 298 aa6.07□□□□□ -1.44
USP48-207ENST00000471752 IGHV3OR16-8A0A075B7F1 116 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 LCE6AA0A183 80 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 TMEM213A2RRL7 107 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 KBTBD11O94819 623 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 CLEC3BP05452 202 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 CD36P16671 472 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 GALP22466 123 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 PSMB6P28072 239 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 RPS19P39019 145 aaKnown RBP6.06□□□□□ -1.44
USP48-207ENST00000471752 KIR2DS2P43631 304 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 RPL27AP46776 148 aaKnown RBP6.06□□□□□ -1.44
USP48-207ENST00000471752 RFX2P48378 723 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 FXYD4P59646 89 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 OR2B8PP59922 312 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 CD81P60033 236 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 LSM3P62310 102 aaKnown RBP6.06□□□□□ -1.44
USP48-207ENST00000471752 SGPP2Q8IWX5 399 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 NECAP1Q8NC96 275 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 NEURL2Q9BR09 285 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 TUBA4BQ9H853 241 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 SLC2A9Q9NRM0 540 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 SIGLEC8Q9NYZ4 499 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 SSR3Q9UNL2 185 aa6.06□□□□□ -1.44
USP48-207ENST00000471752 DNAH17Q9UFH2 4485 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms