RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 NUBP2Q9Y5Y2 271 aa11.12□□□□□ -0.63
SSR4-207ENST00000471724 PLXNB1O43157 2135 aa11.12□□□□□ -0.63
SSR4-207ENST00000471724 TNCP24821 2201 aa11.12□□□□□ -0.63
SSR4-207ENST00000471724 IGHV7-81A0A0B4J1V7 117 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 KRASP01116 189 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 MDKP21741 143 aaPredicted RBP11.11□□□□□ -0.63
SSR4-207ENST00000471724 MAS1LP35410 378 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 SUPT4H1P63272 117 aaKnown RBP11.11□□□□□ -0.63
SSR4-207ENST00000471724 DCTN2Q13561 401 aaKnown RBP11.11□□□□□ -0.63
SSR4-207ENST00000471724 PRSS8Q16651 343 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 SP6Q3SY56 376 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 ZNF562Q6V9R5 426 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 H2BFWTQ7Z2G1 175 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 RNASE11Q8TAA1 199 aaKnown RBP11.11□□□□□ -0.63
SSR4-207ENST00000471724 ABHD5Q8WTS1 349 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 GLYATL2Q8WU03 294 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 CHPT1Q8WUD6 406 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 ARPC1AQ92747 370 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 GON7Q9BXV9 100 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 OR51J1Q9H342 316 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 PARP11Q9NR21 331 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 SERTAD4Q9NUC0 356 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 RNF114Q9Y508 228 aa11.11□□□□□ -0.63
SSR4-207ENST00000471724 CNIH1O95406 144 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 CDS2O95674 445 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 PTTG1O95997 202 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 HLA-AP01891 365 aaKnown RBP11.1□□□□□ -0.63
SSR4-207ENST00000471724 G6PCP35575 357 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 GNB1P62873 340 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 RPL8P62917 257 aaKnown RBP11.1□□□□□ -0.63
SSR4-207ENST00000471724 CX3CL1P78423 397 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 PPP1R1AQ13522 171 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 TMEM187Q14656 261 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 TNXAQ16473 311 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 TMEM95Q3KNT9 176 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 C4orf46Q504U0 113 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 AWAT1Q58HT5 328 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 PLET1Q6UQ28 207 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 Q6ZS46 218 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 ZNF695Q8IW36 515 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 FAM219AQ8IW50 185 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 LGI3Q8N145 548 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 TAF15Q92804 592 aaKnown RBP eCLIP11.1□□□□□ -0.63
SSR4-207ENST00000471724 RRNAD1Q96FB5 475 aaKnown RBP11.1□□□□□ -0.63
SSR4-207ENST00000471724 SEC22AQ96IW7 307 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 TMEM56Q96MV1 263 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 CLCC1Q96S66 551 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 ALX4Q9H161 411 aaPredicted RBP11.1□□□□□ -0.63
SSR4-207ENST00000471724 ZNF430Q9H8G1 570 aaPredicted RBP11.1□□□□□ -0.63
SSR4-207ENST00000471724 FLVCR2Q9UPI3 526 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 TMEM56-RWDD3S4R434 201 aa11.1□□□□□ -0.63
SSR4-207ENST00000471724 TRAV6A0A075B6T7 132 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 DUXBA0A1W2PPF3 345 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 HAX1O00165 279 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 ATP6V0E1O15342 81 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 SNAPC5O75971 98 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 SFT2D2O95562 160 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 IGKV1-39P01597 117 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 IGKV1D-39P04432 117 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 IGF1P05019 195 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 H2AFB2P0C5Z0 115 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 OR4E1P0C645 316 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 VDAC1P21796 283 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 CRIP2P52943 208 aaPredicted RBP11.09□□□□□ -0.63
SSR4-207ENST00000471724 RAB25P57735 213 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 PROK1P58294 105 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 SLC35B1P78383 322 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 FXYD3Q14802 87 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 TMEM268Q5VZI3 342 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 NRARPQ7Z6K4 114 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 LYG2Q86SG7 212 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 KLHDC1Q8N7A1 406 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 DUSP18Q8NEJ0 188 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 PRNDQ9UKY0 176 aa11.09□□□□□ -0.63
SSR4-207ENST00000471724 DNHD1Q96M86 4753 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 TET2Q6N021 2002 aaPredicted RBP11.08□□□□□ -0.64
SSR4-207ENST00000471724 A0A0B4J2A0 478 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 C9orf170A2RU37 121 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 UPK2O00526 184 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 FCN1O00602 326 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 DUS4LO95620 317 aaKnown RBP11.08□□□□□ -0.64
SSR4-207ENST00000471724 HLA-GP17693 338 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 ANXA7P20073 488 aaKnown RBP11.08□□□□□ -0.64
SSR4-207ENST00000471724 MECP2P51608 486 aaKnown RBP11.08□□□□□ -0.64
SSR4-207ENST00000471724 NDPQ00604 133 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 TMEM267Q0VDI3 215 aaPredicted RBP11.08□□□□□ -0.64
SSR4-207ENST00000471724 PJVKQ0ZLH3 352 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 DHRS2Q13268 280 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 THOC7Q6I9Y2 204 aaKnown RBP11.08□□□□□ -0.64
SSR4-207ENST00000471724 STPG2Q8N412 459 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 C3orf56Q8N813 242 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 SGMS2Q8NHU3 365 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 COQ8AQ8NI60 647 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 GRPEL2Q8TAA5 225 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 CASTOR1Q8WTX7 329 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 SRSF12Q8WXF0 261 aaKnown RBP11.08□□□□□ -0.64
SSR4-207ENST00000471724 COMMD5Q9GZQ3 224 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 WNT10AQ9GZT5 417 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 FKBP11Q9NYL4 201 aa11.08□□□□□ -0.64
SSR4-207ENST00000471724 SHPKQ9UHJ6 478 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms