RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MYOD1P15172 320 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 CXCL3P19876 107 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 VMA21Q3ZAQ7 101 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 RBMS3Q6XE24 437 aaKnown RBP15.28■□□□□ 0.04
PSPC1-203ENST00000471658 Q8N9W7 124 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 OR11H7Q8NGC8 314 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 LSM10Q969L4 123 aaKnown RBP15.28■□□□□ 0.04
PSPC1-203ENST00000471658 OR2A7Q96R45 310 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 RAB18Q9NP72 206 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 MGAT4CQ9UBM8 478 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 CUBNO60494 3623 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 DUXBA0A1W2PPF3 345 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 ATG12O94817 140 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 OR2F2O95006 317 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 RRAS2P62070 204 aaPredicted RBP15.28■□□□□ 0.04
PSPC1-203ENST00000471658 TEX45Q8NA69 505 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 OR5R1Q8NH85 324 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 CHIAQ9BZP6 476 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 RANBP3Q9H6Z4 567 aaPredicted RBP15.28■□□□□ 0.04
PSPC1-203ENST00000471658 SIGLEC9Q9Y336 463 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 TMED3Q9Y3Q3 217 aa15.28■□□□□ 0.04
PSPC1-203ENST00000471658 UPK2O00526 184 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 KBTBD11O94819 623 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 IFNA21P01568 189 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 SULT1A3P0DMM9 295 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 SULT1A4P0DMN0 295 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 OR2B8PP59922 312 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 RELBQ01201 579 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 SCGB2A2Q13296 93 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 C5orf64Q2M2E5 130 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 FAM219AQ8IW50 185 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 FAM71E2Q8N5Q1 922 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 AIFM2Q9BRQ8 373 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 BET1LQ9NYM9 111 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 KIAA1456Q9P272 454 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 CACNG5Q9UF02 275 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 PITPNC1Q9UKF7 332 aa15.27■□□□□ 0.03
PSPC1-203ENST00000471658 C5orf51A6NDU8 294 aa15.26■□□□□ 0.03
PSPC1-203ENST00000471658 BTBD17A6NE02 478 aa15.26■□□□□ 0.03
PSPC1-203ENST00000471658 DNAJC9-AS1A6NH13 148 aa15.26■□□□□ 0.03
PSPC1-203ENST00000471658 SPDEFO95238 335 aa15.26■□□□□ 0.03
PSPC1-203ENST00000471658 AMY1AP04745 511 aa15.26■□□□□ 0.03
PSPC1-203ENST00000471658 FAM157CP0CG43 387 aa15.26■□□□□ 0.03
PSPC1-203ENST00000471658 PLGLAQ15195 96 aa15.26■□□□□ 0.03
PSPC1-203ENST00000471658 TMEM167AQ8TBQ9 72 aa15.26■□□□□ 0.03
PSPC1-203ENST00000471658 CHAC2Q8WUX2 184 aa15.26■□□□□ 0.03
PSPC1-203ENST00000471658 ZNF430Q9H8G1 570 aaPredicted RBP15.26■□□□□ 0.03
PSPC1-203ENST00000471658 VPREB3Q9UKI3 123 aa15.26■□□□□ 0.03
PSPC1-203ENST00000471658 MOB4Q9Y3A3 225 aa15.26■□□□□ 0.03
PSPC1-203ENST00000471658 NXPH3O95157 252 aa15.25■□□□□ 0.03
PSPC1-203ENST00000471658 HLA-GP17693 338 aa15.25■□□□□ 0.03
PSPC1-203ENST00000471658 H2BFSP57053 126 aa15.25■□□□□ 0.03
PSPC1-203ENST00000471658 IAH1Q2TAA2 248 aaPredicted RBP15.25■□□□□ 0.03
PSPC1-203ENST00000471658 PPP1R27Q86WC6 154 aa15.25■□□□□ 0.03
PSPC1-203ENST00000471658 C5orf56Q8N8D9 126 aa15.25■□□□□ 0.03
PSPC1-203ENST00000471658 OR8H1Q8NGG4 311 aa15.25■□□□□ 0.03
PSPC1-203ENST00000471658 OR5M8Q8NGP6 311 aa15.25■□□□□ 0.03
PSPC1-203ENST00000471658 C1RLQ9NZP8 487 aa15.25■□□□□ 0.03
PSPC1-203ENST00000471658 PRSS8Q16651 343 aa15.25■□□□□ 0.03
PSPC1-203ENST00000471658 VSTM2AQ8TAG5 236 aa15.25■□□□□ 0.03
PSPC1-203ENST00000471658 ZNF418Q8TF45 676 aaPredicted RBP15.25■□□□□ 0.03
PSPC1-203ENST00000471658 QTRT1Q9BXR0 403 aaKnown RBP15.25■□□□□ 0.03
PSPC1-203ENST00000471658 GSKIPQ9P0R6 139 aa15.25■□□□□ 0.03
PSPC1-203ENST00000471658 POMT1Q9Y6A1 747 aa15.25■□□□□ 0.03
PSPC1-203ENST00000471658 HMX3A6NHT5 357 aa15.24■□□□□ 0.03
PSPC1-203ENST00000471658 SNAPC5O75971 98 aa15.24■□□□□ 0.03
PSPC1-203ENST00000471658 OPN1MWP04001 364 aa15.24■□□□□ 0.03
PSPC1-203ENST00000471658 OPN1MW2P0DN77 364 aa15.24■□□□□ 0.03
PSPC1-203ENST00000471658 OPN1MW3P0DN78 364 aa15.24■□□□□ 0.03
PSPC1-203ENST00000471658 BCAP31P51572 246 aa15.24■□□□□ 0.03
PSPC1-203ENST00000471658 SSBP2P81877 361 aaPredicted RBP15.24■□□□□ 0.03
PSPC1-203ENST00000471658 SMCO1Q147U7 214 aa15.24■□□□□ 0.03
PSPC1-203ENST00000471658 C10orf55Q5SWW7 151 aa15.24■□□□□ 0.03
PSPC1-203ENST00000471658 GSG1LQ6UXU4 331 aa15.24■□□□□ 0.03
PSPC1-203ENST00000471658 OR4A16Q8NH70 328 aa15.24■□□□□ 0.03
PSPC1-203ENST00000471658 RASL11BQ9BPW5 248 aa15.24■□□□□ 0.03
PSPC1-203ENST00000471658 TEP1Q99973 2627 aaKnown RBP15.24■□□□□ 0.03
PSPC1-203ENST00000471658 A0A1B0GU03 582 aa15.23■□□□□ 0.03
PSPC1-203ENST00000471658 CA2P00918 260 aa15.23■□□□□ 0.03
PSPC1-203ENST00000471658 GNB1P62873 340 aa15.23■□□□□ 0.03
PSPC1-203ENST00000471658 BLCAPP62952 87 aa15.23■□□□□ 0.03
PSPC1-203ENST00000471658 Q6ZS46 218 aa15.23■□□□□ 0.03
PSPC1-203ENST00000471658 TMEM86BQ8N661 226 aa15.23■□□□□ 0.03
PSPC1-203ENST00000471658 ZBTB8BQ8NAP8 495 aaPredicted RBP15.23■□□□□ 0.03
PSPC1-203ENST00000471658 OR4A5Q8NH83 315 aa15.23■□□□□ 0.03
PSPC1-203ENST00000471658 C2orf50Q96LR7 162 aa15.23■□□□□ 0.03
PSPC1-203ENST00000471658 PIGBOS1A0A0B4J2F0 54 aa15.22■□□□□ 0.03
PSPC1-203ENST00000471658 E7EUB6 86 aa15.22■□□□□ 0.03
PSPC1-203ENST00000471658 FGF16O43320 207 aa15.22■□□□□ 0.03
PSPC1-203ENST00000471658 GPR137BO60478 399 aa15.22■□□□□ 0.03
PSPC1-203ENST00000471658 PITX3O75364 302 aa15.22■□□□□ 0.03
PSPC1-203ENST00000471658 RBMXL2O75526 392 aaKnown RBP15.22■□□□□ 0.03
PSPC1-203ENST00000471658 RPL8P62917 257 aaKnown RBP15.22■□□□□ 0.03
PSPC1-203ENST00000471658 SPINK9Q5DT21 86 aa15.22■□□□□ 0.03
PSPC1-203ENST00000471658 CXorf66Q5JRM2 361 aaPredicted RBP15.22■□□□□ 0.03
PSPC1-203ENST00000471658 THOC7Q6I9Y2 204 aaKnown RBP15.22■□□□□ 0.03
PSPC1-203ENST00000471658 OR1S1Q8NH92 325 aa15.22■□□□□ 0.03
PSPC1-203ENST00000471658 TAF15Q92804 592 aaKnown RBP eCLIP15.22■□□□□ 0.03
PSPC1-203ENST00000471658 HSPB9Q9BQS6 159 aa15.22■□□□□ 0.03
PSPC1-203ENST00000471658 PLXNB1O43157 2135 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms