RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 C5orf64Q2M2E5 130 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 ZNF181Q2M3W8 571 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 ZBED5Q49AG3 693 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 CLEC12AQ5QGZ9 265 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 DUX4L9Q6RFH8 374 aaPredicted RBP3.75□□□□□ -1.81
CKS1B-204ENST00000471245 VMO1Q7Z5L0 202 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 C11orf53Q8IXP5 236 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 CCDC54Q8NEL0 328 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 OR4C13Q8NGP0 309 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 GABARAPL3Q9BY60 117 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 CACYBPQ9HB71 228 aaKnown RBP3.75□□□□□ -1.81
CKS1B-204ENST00000471245 CCDC167Q9P0B6 97 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 DUX4Q9UBX2 424 aa3.75□□□□□ -1.81
CKS1B-204ENST00000471245 V9GYY5 206 aaPredicted RBP3.75□□□□□ -1.81
CKS1B-204ENST00000471245 TRAV27A0A087WT01 109 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 K7EMT4 169 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 NPFFO15130 113 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 SERPINB7O75635 380 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 IGF2P01344 180 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 COX5BP10606 129 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 CTLA4P16410 223 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 PPIBP23284 216 aaKnown RBP3.74□□□□□ -1.81
CKS1B-204ENST00000471245 HRH1P35367 487 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 GPX4P36969 197 aaPredicted RBP3.74□□□□□ -1.81
CKS1B-204ENST00000471245 OR1E2P47887 323 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 NUTF2P61970 127 aaKnown RBP3.74□□□□□ -1.81
CKS1B-204ENST00000471245 REG3AQ06141 175 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 MPPED2Q15777 294 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 LY6EQ16553 131 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 MESTQ5EB52 335 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 ARL9Q6T311 187 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 FBXW12Q6X9E4 464 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 NAA40Q86UY6 237 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 OR8G5Q8NG78 346 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 TMEM239Q8WW34 195 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 BAALCQ8WXS3 180 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 RPEQ96AT9 228 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 SGTBQ96EQ0 304 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 FAM210BQ96KR6 192 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 Q96M85 177 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 CGREF1Q99674 301 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 ANAPC11Q9NYG5 84 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 F11RQ9Y624 299 aaKnown RBP3.74□□□□□ -1.81
CKS1B-204ENST00000471245 HERC2O95714 4834 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 DNAH10Q8IVF4 4471 aa3.74□□□□□ -1.81
CKS1B-204ENST00000471245 RAB19A4D1S5 217 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 A6NDN8 102 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 IQCF6A8MYZ5 107 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 SMKR1H3BMG3 65 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 H3BN98 237 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 FXYD1O00168 92 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 CDC42EP2O14613 210 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 FFAR1O14842 300 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 RER1O15258 196 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 SGCEO43556 437 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 OR5F1O95221 314 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 CST4P01036 141 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 RAB4AP20338 218 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 PAX6P26367 422 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 HTR2BP41595 481 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 RBM34P42696 430 aaKnown RBP3.73□□□□□ -1.81
CKS1B-204ENST00000471245 SRP9P49458 86 aaKnown RBP3.73□□□□□ -1.81
CKS1B-204ENST00000471245 SLC18A1P54219 525 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 FXYD6P3P58550 94 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 HIST1H3AP68431 136 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 KLRD1Q13241 179 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 PSG5Q15238 335 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 HIST2H3PS2Q5TEC6 136 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 UBE2UQ5VVX9 321 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 ZNF826PQ6ZT77 177 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 HIST2H3AQ71DI3 136 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 CBLN2Q8IUK8 224 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 SLC30A8Q8IWU4 369 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 Q8N7P7 452 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 OR13G1Q8NGZ3 307 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 OR51A7Q8NH64 312 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 OR10A6Q8NH74 314 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 LGALS14Q8TCE9 139 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 C17orf50Q8WW18 174 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 TLCD1Q96CP7 247 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 RBP7Q96R05 134 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 SIRT7Q9NRC8 400 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 STX18Q9P2W9 335 aaKnown RBP3.73□□□□□ -1.81
CKS1B-204ENST00000471245 LHFPL6Q9Y693 200 aa3.73□□□□□ -1.81
CKS1B-204ENST00000471245 SORL1Q92673 2214 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 IGHV3OR15-7A0A075B7D8 119 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 EVPLLA8MZ36 301 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 PANO1I0J062 215 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 ANGPTL7O43827 346 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 FKBP6O75344 327 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 GYPAP02724 150 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 TFF1P04155 84 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 PSKH1P11801 424 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 IFI30P13284 250 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 NQO2P16083 231 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 CD200P41217 278 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 TAS2R41P59536 307 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 MAGOHP61326 146 aaKnown RBP3.72□□□□□ -1.81
CKS1B-204ENST00000471245 PCBD1P61457 104 aa3.72□□□□□ -1.81
CKS1B-204ENST00000471245 PRKCDQ05655 676 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms