RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 EFCAB10A6NFE3 127 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 SRRM4A7MD48 611 aaKnown RBP6.56□□□□□ -1.36
XRN1-208ENST00000470537 NPIPB5A8MRT5 1133 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 SLC22A5O76082 557 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 CRYZL1O95825 349 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 LALBAP00709 142 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 HLA-AP01891 365 aaKnown RBP6.56□□□□□ -1.36
XRN1-208ENST00000470537 PRH1P02810 166 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 PSMB6P28072 239 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 MAS1LP35410 378 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 ZNF45Q02386 682 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 OR10K2Q6IF99 312 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 CLEC19AQ6UXS0 136 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 FAM89BQ8N5H3 189 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 ZFP41Q8N8Y5 198 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 OR6M1Q8NGM8 313 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 AIFM2Q9BRQ8 373 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 GINS4Q9BRT9 223 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 ZNF430Q9H8G1 570 aaPredicted RBP6.56□□□□□ -1.36
XRN1-208ENST00000470537 MLXQ9UH92 298 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 CLEC2DQ9UHP7 191 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 HERC2O95714 4834 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 KMT2AQ03164 3969 aa6.56□□□□□ -1.36
XRN1-208ENST00000470537 PNMA8CA0A1B0GUJ8 204 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 OR4C46A6NHA9 309 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 TMEM14DPA8MWL7 114 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 C11orf94C9JXX5 98 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 TSPAN4O14817 238 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 MYL12BO14950 172 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 BET1O15155 118 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 FABP7O15540 132 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 RBMXL2O75526 392 aaKnown RBP6.55□□□□□ -1.36
XRN1-208ENST00000470537 CLEC3BP05452 202 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 CD3GP09693 182 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 C8orf88P0DMB2 117 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 ST3GAL4Q11206 333 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 SMN1Q16637 294 aaKnown RBP6.55□□□□□ -1.36
XRN1-208ENST00000470537 ZNF585BQ52M93 769 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 ACSM3Q53FZ2 586 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 RBM48Q5RL73 367 aaKnown RBP6.55□□□□□ -1.36
XRN1-208ENST00000470537 BTNL8Q6UX41 500 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 IDO2Q6ZQW0 420 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 NR2C2APQ86WQ0 139 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 SETD9Q8NE22 299 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 OR56B1Q8NGI3 324 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 APH1BQ8WW43 257 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 CACNG8Q8WXS5 425 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 RARRES2Q99969 163 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 NICN1Q9BSH3 213 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 OR51E2Q9H255 320 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 PLGRKTQ9HBL7 147 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 SLC2A9Q9NRM0 540 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 AP5S1Q9NUS5 200 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 DMRT1Q9Y5R6 373 aa6.55□□□□□ -1.36
XRN1-208ENST00000470537 TRBV6-7A0A0A0MS04 114 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 MPTX1A8MV57 137 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 SOCS1O15524 211 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 WBP4O75554 376 aaKnown RBP6.54□□□□□ -1.36
XRN1-208ENST00000470537 CDK1P06493 297 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 CD36P16671 472 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 DUTP33316 252 aaKnown RBP6.54□□□□□ -1.36
XRN1-208ENST00000470537 PSMD7P51665 324 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 WNT4P56705 351 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 EWSR1Q01844 656 aaKnown RBP eCLIP6.54□□□□□ -1.36
XRN1-208ENST00000470537 UNC119Q13432 240 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 ARFRP1Q13795 201 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 HSD17B12Q53GQ0 312 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 PLET1Q6UQ28 207 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 ZNF485Q8NCK3 441 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 FYTTD1Q96QD9 318 aaKnown RBP6.54□□□□□ -1.36
XRN1-208ENST00000470537 OR2A7Q96R45 310 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 HDHD3Q9BSH5 251 aaPredicted RBP6.54□□□□□ -1.36
XRN1-208ENST00000470537 CSTL1Q9H114 145 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 LPAR5Q9H1C0 372 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 MAP6D1Q9H9H5 199 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 FBXL17Q9UF56 701 aa6.54□□□□□ -1.36
XRN1-208ENST00000470537 IGKV1-6A0A0C4DH72 117 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 HRASP01112 189 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 CRYGCP07315 174 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 CTXN2P0C2S0 81 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 SAA1P0DJI8 122 aaPredicted RBP6.53□□□□□ -1.36
XRN1-208ENST00000470537 GADD45AP24522 165 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 TALDO1P37837 337 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 RPL27AP46776 148 aaKnown RBP6.53□□□□□ -1.36
XRN1-208ENST00000470537 QRFPP83859 136 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 P2RY14Q15391 338 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 MRGPRG-AS1Q2M3A8 158 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 CEACAM19Q7Z692 300 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 ARHGAP5-AS1Q96IT6 56 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 CABLES2Q9BTV7 478 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 PECRQ9BY49 303 aa6.53□□□□□ -1.36
XRN1-208ENST00000470537 C11orf68Q9H3H3 251 aaKnown RBP6.53□□□□□ -1.36
XRN1-208ENST00000470537 DAZ1Q9NQZ3 744 aaKnown RBP6.53□□□□□ -1.36
XRN1-208ENST00000470537 SMPD3Q9NY59 655 aaPredicted RBP6.53□□□□□ -1.36
XRN1-208ENST00000470537 HMX3A6NHT5 357 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 IGLL5B9A064 214 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 SLC17A2O00624 439 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 MRPS14O60783 128 aaKnown RBP6.52□□□□□ -1.37
XRN1-208ENST00000470537 FCGR3BO75015 233 aa6.52□□□□□ -1.37
XRN1-208ENST00000470537 ZNF735P0CB33 412 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms