RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 TMEM183BQ1AE95 376 aa3.29□□□□□ -1.88
GCFC2-205ENST00000470197 NOXRED1Q6NXP6 359 aa3.29□□□□□ -1.88
GCFC2-205ENST00000470197 TMEM183AQ8IXX5 376 aa3.29□□□□□ -1.88
GCFC2-205ENST00000470197 C11orf42Q8N5U0 333 aa3.29□□□□□ -1.88
GCFC2-205ENST00000470197 DUX3Q96PT4 197 aa3.29□□□□□ -1.88
GCFC2-205ENST00000470197 OR2M2Q96R28 347 aa3.29□□□□□ -1.88
GCFC2-205ENST00000470197 DPY30Q9C005 99 aa3.29□□□□□ -1.88
GCFC2-205ENST00000470197 MGAM2Q2M2H8 2515 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 CCRL2O00421 344 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 SYNGR1O43759 233 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 CPSF4O95639 269 aaKnown RBP3.28□□□□□ -1.88
GCFC2-205ENST00000470197 INSP01308 110 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 RAB3AP20336 220 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 HTR1DP28221 377 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 CDK5Q00535 292 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 SKP2Q13309 424 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 SPATA31B1PQ5VZV4 182 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 C3orf33Q6P1S2 294 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 AAED1Q7RTV5 226 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 RAB8BQ92930 207 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 ZNF382Q96SR6 550 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 SND1-IT1Q9HBX3 110 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 VGLL3A8MV65 326 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 ATP6V1G2-DDX39BF2Z307 99 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 COPEO14579 308 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 KCNK2O95069 426 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 HMGN2P05204 90 aaKnown RBP3.28□□□□□ -1.88
GCFC2-205ENST00000470197 LINC00032P0C843 101 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 CXCL3P19876 107 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 AP3S2P59780 193 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 MED21Q13503 144 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 C1DQ13901 141 aaKnown RBP3.28□□□□□ -1.88
GCFC2-205ENST00000470197 PIGXQ8TBF5 258 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 RBP7Q96R05 134 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 TMEM216Q9P0N5 145 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 ZNF706Q9Y5V0 76 aaPredicted RBP3.28□□□□□ -1.88
GCFC2-205ENST00000470197 ARHGAP21Q5T5U3 1957 aa3.28□□□□□ -1.88
GCFC2-205ENST00000470197 E7EQL1 145 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 IL3RAP26951 378 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 LOXL1Q08397 574 aaPredicted RBP3.27□□□□□ -1.89
GCFC2-205ENST00000470197 PLPPR5Q32ZL2 321 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 ZNF678Q5SXM1 525 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 TMPPEQ6ZT21 453 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 DCAKDQ8WVC6 231 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 RBMXL1Q96E39 390 aaKnown RBP3.27□□□□□ -1.89
GCFC2-205ENST00000470197 MAP1LC3AQ9H492 121 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 PLCE1Q9P212 2302 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 LRRN3E7EW58 273 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 FABP7O15540 132 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 SPNP16150 400 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 ELK4P28324 431 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 SSTR5P35346 364 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 IDH3GP51553 393 aaPredicted RBP3.27□□□□□ -1.89
GCFC2-205ENST00000470197 CMC4P56277 68 aaPredicted RBP3.27□□□□□ -1.89
GCFC2-205ENST00000470197 SYNJ2BPP57105 145 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 ATP6AP1LQ52LC2 224 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 ACSM3Q53FZ2 586 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 MESTQ5EB52 335 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 CLEC19AQ6UXS0 136 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 C19orf18Q8NEA5 215 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 OR1P1Q8NH06 330 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 OR5W2Q8NH69 310 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 SULT4A1Q9BR01 284 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 RTBDNQ9BSG5 229 aaPredicted RBP3.27□□□□□ -1.89
GCFC2-205ENST00000470197 PLA2G12AQ9BZM1 189 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 BPESC1Q9GZL8 116 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 CSMD2Q7Z408 3487 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 OR4A8P0C604 315 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 CD79AP11912 226 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 NMUP48645 174 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 ZNF117Q03924 483 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 CDNFQ49AH0 187 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 FAM222AQ5U5X8 452 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 TNFAIP8L2Q6P589 184 aaPredicted RBP3.27□□□□□ -1.89
GCFC2-205ENST00000470197 UGT2A3Q6UWM9 527 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 TEX29Q8N6K0 151 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 DDIT4LQ96D03 193 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 ZNF649Q9BS31 505 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 C1orf50Q9BV19 199 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 MMP26Q9NRE1 261 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 RPS6KB2Q9UBS0 482 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 KIAA1549Q9HCM3 1950 aa3.27□□□□□ -1.89
GCFC2-205ENST00000470197 SPENQ96T58 3664 aaKnown RBP3.27□□□□□ -1.89
GCFC2-205ENST00000470197 CPAMD8Q8IZJ3 1885 aa3.26□□□□□ -1.89
GCFC2-205ENST00000470197 H3BQF6 201 aa3.26□□□□□ -1.89
GCFC2-205ENST00000470197 PSPHP1O15172 72 aa3.26□□□□□ -1.89
GCFC2-205ENST00000470197 EIF1BO60739 113 aaKnown RBP3.26□□□□□ -1.89
GCFC2-205ENST00000470197 NQO1P15559 274 aaKnown RBP3.26□□□□□ -1.89
GCFC2-205ENST00000470197 HSD11B1P28845 292 aa3.26□□□□□ -1.89
GCFC2-205ENST00000470197 MEF2CQ06413 473 aaPredicted RBP3.26□□□□□ -1.89
GCFC2-205ENST00000470197 TOMM34Q15785 309 aaPredicted RBP3.26□□□□□ -1.89
GCFC2-205ENST00000470197 LRRC75BQ2VPJ9 315 aa3.26□□□□□ -1.89
GCFC2-205ENST00000470197 PDZD11Q5EBL8 140 aa3.26□□□□□ -1.89
GCFC2-205ENST00000470197 SLC25A30Q5SVS4 291 aa3.26□□□□□ -1.89
GCFC2-205ENST00000470197 FAM71E1Q6IPT2 247 aa3.26□□□□□ -1.89
GCFC2-205ENST00000470197 MTERF4Q7Z6M4 381 aaKnown RBP3.26□□□□□ -1.89
GCFC2-205ENST00000470197 HMGN2P46Q86SG4 172 aa3.26□□□□□ -1.89
GCFC2-205ENST00000470197 ZNF485Q8NCK3 441 aa3.26□□□□□ -1.89
GCFC2-205ENST00000470197 CCDC54Q8NEL0 328 aa3.26□□□□□ -1.89
GCFC2-205ENST00000470197 ZNRF2Q8NHG8 242 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms