RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 RNFT1Q5M7Z0 435 aa13.4□□□□□ -0.26
BRAT1-204ENST00000469750 UQCR10Q9UDW1 63 aa13.4□□□□□ -0.26
BRAT1-204ENST00000469750 IFITM10A6NMD0 228 aa13.4□□□□□ -0.26
BRAT1-204ENST00000469750 PSG9Q00887 426 aa13.4□□□□□ -0.26
BRAT1-204ENST00000469750 ZNF841Q6ZN19 808 aa13.4□□□□□ -0.26
BRAT1-204ENST00000469750 C1QL2Q7Z5L3 287 aa13.4□□□□□ -0.26
BRAT1-204ENST00000469750 OR51G1Q8NGK1 321 aa13.4□□□□□ -0.26
BRAT1-204ENST00000469750 ATP5IP56385 69 aaPredicted RBP13.4□□□□□ -0.26
BRAT1-204ENST00000469750 SYT8Q8NBV8 401 aa13.4□□□□□ -0.26
BRAT1-204ENST00000469750 TM2D1Q9BX74 207 aa13.4□□□□□ -0.26
BRAT1-204ENST00000469750 C1QTNF5Q9BXJ0 243 aa13.4□□□□□ -0.26
BRAT1-204ENST00000469750 CACNA1EQ15878 2313 aa13.4□□□□□ -0.26
BRAT1-204ENST00000469750 CDC42EP3Q9UKI2 254 aa13.4□□□□□ -0.26
BRAT1-204ENST00000469750 TBX6O95947 436 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-204ENST00000469750 SRSF9Q13242 221 aaKnown RBP eCLIP13.39□□□□□ -0.27
BRAT1-204ENST00000469750 ZNF124Q15973 351 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 POC1AQ8NBT0 407 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 C19orf24Q9BVV8 132 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 LOC102723996A0A087X1L8 192 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 IGHV2OR16-5A0A0B4J2B6 119 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 CGB1A6NKQ9 187 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 C12orf54Q6X4T0 127 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 LOC389332A0A1B0GUA5 103 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 FABP2P12104 132 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 DDB2Q92466 427 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 ZNF318Q5VUA4 2279 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 C12orf77C9JDV5 145 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 RAB9AP51151 201 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 SPATA45Q537H7 98 aa13.39□□□□□ -0.27
BRAT1-204ENST00000469750 ARL14EPLP0DKL9 152 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 LOC285556D6RIA3 1793 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 RPL39P5Q59GN2 51 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 ABCA7Q8IZY2 2146 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 WDYHV1Q96HA8 205 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 SHISA3A0PJX4 238 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 KLK2P20151 261 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 IGHV1-2P23083 117 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 OR1P1Q8NH06 330 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 EEF1AKMT3Q96AZ1 226 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 CRXO43186 299 aaPredicted RBP13.38□□□□□ -0.27
BRAT1-204ENST00000469750 MDKP21741 143 aaPredicted RBP13.38□□□□□ -0.27
BRAT1-204ENST00000469750 BSPH1Q075Z2 132 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 RRN3P1Q2M238 152 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 NEU4Q8WWR8 484 aaPredicted RBP13.38□□□□□ -0.27
BRAT1-204ENST00000469750 NPIPB3Q92617 1050 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 REPIN1Q9BWE0 567 aaKnown RBP13.38□□□□□ -0.27
BRAT1-204ENST00000469750 SCN2AQ99250 2005 aa13.38□□□□□ -0.27
BRAT1-204ENST00000469750 GPR61Q9BZJ8 451 aa13.37□□□□□ -0.27
BRAT1-204ENST00000469750 NDUFS8O00217 210 aa13.37□□□□□ -0.27
BRAT1-204ENST00000469750 TM4SF5O14894 197 aa13.37□□□□□ -0.27
BRAT1-204ENST00000469750 CSRP1P21291 193 aaKnown RBP13.37□□□□□ -0.27
BRAT1-204ENST00000469750 RELQ04864 619 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-204ENST00000469750 NABP2Q9BQ15 211 aa13.37□□□□□ -0.27
BRAT1-204ENST00000469750 IGHV3OR16-10A0A075B7F0 116 aa13.37□□□□□ -0.27
BRAT1-204ENST00000469750 FBLL1A6NHQ2 334 aaKnown RBP13.37□□□□□ -0.27
BRAT1-204ENST00000469750 SPSB4Q96A44 273 aa13.37□□□□□ -0.27
BRAT1-204ENST00000469750 MRPL32Q9BYC8 188 aaKnown RBP13.37□□□□□ -0.27
BRAT1-204ENST00000469750 CBLN4Q9NTU7 201 aa13.37□□□□□ -0.27
BRAT1-204ENST00000469750 TRGC2P03986 189 aa13.37□□□□□ -0.27
BRAT1-204ENST00000469750 PSG7Q13046 419 aa13.37□□□□□ -0.27
BRAT1-204ENST00000469750 FLVCR1-AS1Q8TAF5 88 aa13.37□□□□□ -0.27
BRAT1-204ENST00000469750 CKS2P33552 79 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 RPS20P60866 119 aaKnown RBP13.36□□□□□ -0.27
BRAT1-204ENST00000469750 RELBQ01201 579 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 DMRTA1Q5VZB9 504 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 OSR1Q8TAX0 266 aaPredicted RBP13.36□□□□□ -0.27
BRAT1-204ENST00000469750 H3BVH4 76 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 NPPCP23582 126 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 ZNF837Q96EG3 531 aaPredicted RBP13.36□□□□□ -0.27
BRAT1-204ENST00000469750 SH3BGRL3Q9H299 93 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 ZFP30Q9Y2G7 519 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 HLA-DQA1P01909 254 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 TMEM177Q53S58 311 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 C9orf106Q8NAJ2 232 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 RAX2Q96IS3 184 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 DPM3Q9P2X0 92 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 ALPK2Q86TB3 2170 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 LINC00587B1AMM8 73 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 TCTAP57738 103 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 FAM216BQ8N7L0 139 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 NPIPB6E9PJ23 425 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 HAX1O00165 279 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 RND3P61587 244 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 GATAD1Q8WUU5 269 aa13.36□□□□□ -0.27
BRAT1-204ENST00000469750 DANCRP0C864 163 aa13.35□□□□□ -0.27
BRAT1-204ENST00000469750 LHX2P50458 406 aa13.35□□□□□ -0.27
BRAT1-204ENST00000469750 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-204ENST00000469750 OR11H4Q8NGC9 324 aa13.35□□□□□ -0.27
BRAT1-204ENST00000469750 ZFP36L1Q07352 338 aaKnown RBP13.35□□□□□ -0.27
BRAT1-204ENST00000469750 Q5PR19 223 aa13.35□□□□□ -0.27
BRAT1-204ENST00000469750 FAM201AQ5SY85 155 aa13.35□□□□□ -0.27
BRAT1-204ENST00000469750 DCTN5Q9BTE1 182 aa13.35□□□□□ -0.27
BRAT1-204ENST00000469750 SSBP3Q9BWW4 388 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-204ENST00000469750 PATJQ8NI35 1801 aa13.35□□□□□ -0.27
BRAT1-204ENST00000469750 IGHV3OR16-12A0A075B7B8 117 aa13.35□□□□□ -0.27
BRAT1-204ENST00000469750 H0YL77 283 aa13.35□□□□□ -0.27
BRAT1-204ENST00000469750 M0R3E3 92 aa13.35□□□□□ -0.27
BRAT1-204ENST00000469750 CA2P00918 260 aa13.35□□□□□ -0.27
BRAT1-204ENST00000469750 CRYBB3P26998 211 aa13.35□□□□□ -0.27
BRAT1-204ENST00000469750 CX3CL1P78423 397 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms