RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 OR10P1Q8NGE3 313 aa7.62□□□□□ -1.19
SMC1A-205ENST00000469129 OR4C13Q8NGP0 309 aa7.62□□□□□ -1.19
SMC1A-205ENST00000469129 HARBI1Q96MB7 349 aa7.62□□□□□ -1.19
SMC1A-205ENST00000469129 NABP2Q9BQ15 211 aa7.62□□□□□ -1.19
SMC1A-205ENST00000469129 PSMG3Q9BT73 122 aaPredicted RBP7.62□□□□□ -1.19
SMC1A-205ENST00000469129 TMEM147Q9BVK8 224 aa7.62□□□□□ -1.19
SMC1A-205ENST00000469129 QTRT1Q9BXR0 403 aaKnown RBP7.62□□□□□ -1.19
SMC1A-205ENST00000469129 REG4Q9BYZ8 158 aa7.62□□□□□ -1.19
SMC1A-205ENST00000469129 ONECUT1Q9UBC0 465 aa7.62□□□□□ -1.19
SMC1A-205ENST00000469129 ZNF257Q9Y2Q1 563 aa7.62□□□□□ -1.19
SMC1A-205ENST00000469129 ABCA4P78363 2273 aa7.62□□□□□ -1.19
SMC1A-205ENST00000469129 FLNBO75369 2602 aaKnown RBP7.61□□□□□ -1.19
SMC1A-205ENST00000469129 LOC105371242A0A075B767 164 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 ENSAO43768 121 aaKnown RBP7.61□□□□□ -1.19
SMC1A-205ENST00000469129 SOX15O60248 233 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 LY6HO94772 140 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 KBTBD11O94819 623 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 IGLV1-47P01700 117 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 ARG1P05089 322 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 USF1P22415 310 aaPredicted RBP7.61□□□□□ -1.19
SMC1A-205ENST00000469129 CEACAM3P40198 252 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 PDLIM4P50479 330 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 ATP5IP56385 69 aaPredicted RBP7.61□□□□□ -1.19
SMC1A-205ENST00000469129 LINC00205P59089 165 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 RAB11AP62491 216 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 VMA21Q3ZAQ7 101 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 AKR1C8PQ5T2L2 129 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 PXDC1Q5TGL8 231 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 TMEM182Q6ZP80 229 aaPredicted RBP7.61□□□□□ -1.19
SMC1A-205ENST00000469129 C1orf229Q6ZS94 237 aaPredicted RBP7.61□□□□□ -1.19
SMC1A-205ENST00000469129 ZNF525Q8N782 197 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 LFNGQ8NES3 379 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 OR2G3Q8NGZ4 309 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 OR5B3Q8NH48 314 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 ST6GALNAC6Q969X2 333 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 MARC2Q969Z3 335 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 FLYWCH2Q96CP2 140 aaKnown RBP7.61□□□□□ -1.19
SMC1A-205ENST00000469129 OR4C12Q96R67 309 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 CCL19Q99731 98 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 HEYLQ9NQ87 328 aaPredicted RBP7.61□□□□□ -1.19
SMC1A-205ENST00000469129 TMEM14BQ9NUH8 114 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 UQCC1Q9NVA1 299 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 TCF19Q9Y242 345 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 TIMM9Q9Y5J7 89 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 HECTD1Q9ULT8 2610 aa7.61□□□□□ -1.19
SMC1A-205ENST00000469129 A8MXK9 166 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 C22orf46C9J442 243 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 OVOL3O00110 214 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 UPK2O00526 184 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 IGHV2-5P01817 119 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 SAA1P0DJI8 122 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-205ENST00000469129 RAB2AP61019 212 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 HSPE1P61604 102 aaKnown RBP7.6□□□□□ -1.19
SMC1A-205ENST00000469129 ZNF616Q08AN1 781 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 PJVKQ0ZLH3 352 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 OR8G2PQ6IF36 304 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 C1orf122Q6ZSJ8 110 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 CCDC28AQ8IWP9 274 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 MRPL41Q8IXM3 137 aaKnown RBP7.6□□□□□ -1.19
SMC1A-205ENST00000469129 C11orf42Q8N5U0 333 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 LHX4Q969G2 390 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 ZDHHC16Q969W1 377 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 RPEQ96AT9 228 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 PSMG3-AS1Q96PY0 264 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 GGACTQ9BVM4 153 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 MS4A7Q9GZW8 240 aaPredicted RBP7.6□□□□□ -1.19
SMC1A-205ENST00000469129 SH3BGRL3Q9H299 93 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 KCNIP2Q9NS61 270 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 OR51B2Q9Y5P1 312 aa7.6□□□□□ -1.19
SMC1A-205ENST00000469129 SPTAN1Q13813 2472 aaKnown RBP7.6□□□□□ -1.19
SMC1A-205ENST00000469129 UBE2L5PA0A1B0GUS4 154 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 A1L4Q6 167 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 BTBD17A6NE02 478 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 C17orf112F2Z3M2 114 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 BUB1B-PAK6H3BSN5 160 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 NDUFS8O00217 210 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 TSPAN15O95858 294 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 IFNA10P01566 189 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 HBE1P02100 147 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 IL6RP08887 468 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-205ENST00000469129 VDAC2P45880 294 aaPredicted RBP7.59□□□□□ -1.19
SMC1A-205ENST00000469129 LGALS7P47929 136 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 REG1BP48304 166 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 SERF2P84101 59 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 PRCDQ00LT1 54 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 LRRC75BQ2VPJ9 315 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 HAPLN4Q86UW8 402 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 VKORC1L1Q8N0U8 176 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 TMEM167AQ8TBQ9 72 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 PIMREGQ9BSJ6 248 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 COMMD5Q9GZQ3 224 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 WDR61Q9GZS3 305 aaKnown RBP7.59□□□□□ -1.19
SMC1A-205ENST00000469129 NARFLQ9H6Q4 476 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 PLEKHA3Q9HB20 300 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 ZNRD1Q9P1U0 126 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 KPTNQ9Y664 436 aa7.59□□□□□ -1.19
SMC1A-205ENST00000469129 DOPEY1Q5JWR5 2465 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 USP9YO00507 2555 aaPredicted RBP7.58□□□□□ -1.2
SMC1A-205ENST00000469129 TRAV3A0A0B4J244 114 aa7.58□□□□□ -1.2
SMC1A-205ENST00000469129 A0A1W2PN81 502 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 273.5 ms