RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SLC36A2Q495M3 483 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 SDHAF4Q5VUM1 108 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 CYHR1Q6ZMK1 362 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 OLIG3Q7RTU3 272 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 CPNE9Q8IYJ1 553 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 TMEM251Q8N6I4 163 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 DDIT4LQ96D03 193 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 REEP6Q96HR9 211 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 TMEM56Q96MV1 263 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 GPR22Q99680 433 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 PRSS27Q9BQR3 290 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 EBPLQ9BY08 206 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 U3KQK5 164 aa2.45□□□□□ -2.02
LSM5-209ENST00000468872 UBR2Q8IWV8 1755 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 TET1Q8NFU7 2136 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 F5H768 121 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 TRAPPC3O43617 180 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 DEXIO95424 95 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 PSMG1O95456 288 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 HIST1H1CP16403 213 aaKnown RBP2.44□□□□□ -2.02
LSM5-209ENST00000468872 CBX5P45973 191 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 PYDC2Q56P42 97 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 FAM45BPQ6NSW5 357 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 Q6ZQT7 251 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 EIF4E3Q8N5X7 224 aaKnown RBP2.44□□□□□ -2.02
LSM5-209ENST00000468872 BPIFB6Q8NFQ5 453 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 IGF2BP2-AS1Q96M15 143 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 PKMYT1Q99640 499 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 SMR3AQ99954 134 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 B9D2Q9BPU9 175 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 SLC19A3Q9BZV2 496 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 OR2D2Q9H210 308 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 ABCG5Q9H222 651 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 OR51E2Q9H255 320 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 ZNF230Q9UIE0 474 aaPredicted RBP2.44□□□□□ -2.02
LSM5-209ENST00000468872 VWA8A3KMH1 1905 aa2.44□□□□□ -2.02
LSM5-209ENST00000468872 TRRAPQ9Y4A5 3859 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 A6NED7 52 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 OR5H14A6NHG9 310 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 TMEM210A6NLX4 147 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 GGTLC3B5MD39 225 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 D6RAR5 112 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 C5orf67F2Z3F1 127 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 HPGDSO60760 199 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 CTLA4P16410 223 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 ZNF708P17019 499 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 EVI2BP34910 448 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 ACTR1BP42025 376 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 DLX6P56179 175 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 RAB8AP61006 207 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 DEFA6Q01524 100 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 DHRS2Q13268 280 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 C4orf26Q17RF5 130 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 TBC1D28Q2M2D7 210 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 SAPCD1Q5SSQ6 148 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 RIBC1Q8N443 379 aaPredicted RBP2.43□□□□□ -2.02
LSM5-209ENST00000468872 CDC26Q8NHZ8 85 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 RNF133Q8WVZ7 376 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 APOBEC3DQ96AK3 386 aaPredicted RBP2.43□□□□□ -2.02
LSM5-209ENST00000468872 CLDN23Q96B33 292 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 CCDC94Q9BW85 323 aaPredicted RBP2.43□□□□□ -2.02
LSM5-209ENST00000468872 OR5V1Q9UGF6 321 aa2.43□□□□□ -2.02
LSM5-209ENST00000468872 IBTKQ9P2D0 1353 aaPredicted RBP2.43□□□□□ -2.02
LSM5-209ENST00000468872 TINCRA0A1B0GVN0 87 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 BIRC5O15392 142 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 GPR75O95800 540 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 ZNF7P17097 686 aaPredicted RBP2.42□□□□□ -2.02
LSM5-209ENST00000468872 AKR1C4P17516 323 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 CDKN2CP42773 168 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 PSMD7P51665 324 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 MP68P56378 58 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 MGAT3Q09327 533 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 MLLT11Q13015 90 aaPredicted RBP2.42□□□□□ -2.02
LSM5-209ENST00000468872 SRSF6Q13247 344 aaKnown RBP2.42□□□□□ -2.02
LSM5-209ENST00000468872 MMDQ15546 238 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 IMPG1Q17R60 797 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 C8orf74Q6P047 294 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 LYPD6Q86Y78 171 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 LRRC34Q8IZ02 419 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 MUC15Q8N387 334 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 LY6G5BQ8NDX9 201 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 ATP6V1C2Q8NEY4 427 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 OR4A5Q8NH83 315 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 MUC7Q8TAX7 377 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 CMBLQ96DG6 245 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 CMTM5Q96DZ9 223 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 TRIB3Q96RU7 358 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 DERL2Q9GZP9 239 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 USE1Q9NZ43 259 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 ECM29Q5VYK3 1845 aa2.42□□□□□ -2.02
LSM5-209ENST00000468872 IGKV1D-37A0A075B6S9 117 aa2.41□□□□□ -2.02
LSM5-209ENST00000468872 GPR171O14626 319 aa2.41□□□□□ -2.02
LSM5-209ENST00000468872 UGT2B11O75310 529 aa2.41□□□□□ -2.02
LSM5-209ENST00000468872 KRT7P08729 469 aa2.41□□□□□ -2.02
LSM5-209ENST00000468872 C8orf88P0DMB2 117 aa2.41□□□□□ -2.02
LSM5-209ENST00000468872 HLA-EP13747 358 aa2.41□□□□□ -2.02
LSM5-209ENST00000468872 CRABP2P29373 138 aa2.41□□□□□ -2.02
LSM5-209ENST00000468872 GRPRP30550 384 aa2.41□□□□□ -2.02
LSM5-209ENST00000468872 NKX2-5P52952 324 aaPredicted RBP2.41□□□□□ -2.02
LSM5-209ENST00000468872 RAB2AP61019 212 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms