RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 IDO2Q6ZQW0 420 aa15.63■□□□□ 0.09
NPHP4-206ENST00000468253 OR6Q1Q8NGQ2 317 aa15.63■□□□□ 0.09
NPHP4-206ENST00000468253 KLK15Q9H2R5 256 aa15.63■□□□□ 0.09
NPHP4-206ENST00000468253 V9GYH0 126 aa15.63■□□□□ 0.09
NPHP4-206ENST00000468253 TNCP24821 2201 aa15.63■□□□□ 0.09
NPHP4-206ENST00000468253 NOTCH3Q9UM47 2321 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 MSGN1A6NI15 193 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 H3BUA1 57 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 SOX15O60248 233 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 KBTBD11O94819 623 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 RLN1P04808 185 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 PF4V1P10720 104 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 GNB1P62873 340 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 ECSCRQ19T08 205 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 ZNF585BQ52M93 769 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 SPANXN2Q5MJ10 180 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 FOXB2Q5VYV0 432 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 VKORC1L1Q8N0U8 176 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 ZNF491Q8N8L2 437 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 GRPEL2Q8TAA5 225 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 DEDD2Q8WXF8 326 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 SPIN2AQ99865 258 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 SPIN2BQ9BPZ2 258 aa15.62■□□□□ 0.09
NPHP4-206ENST00000468253 FAM103A1Q9BTL3 118 aaKnown RBP15.62■□□□□ 0.09
NPHP4-206ENST00000468253 A0A1W2PN81 502 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 MPPED1O15442 326 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 CHRNA7P36544 502 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 MYCNOSP40205 109 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 RUNX1Q01196 453 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 SURF2Q15527 256 aaPredicted RBP15.61■□□□□ 0.09
NPHP4-206ENST00000468253 TNXAQ16473 311 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 PHLDA2Q53GA4 152 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 PYDC2Q56P42 97 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 TBC1D26Q86UD7 250 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 Q8N402 240 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 PRRT1Q99946 306 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 SLA2Q9H6Q3 261 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 SLC2A9Q9NRM0 540 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 SLC2A8Q9NY64 477 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 VSIG4Q9Y279 399 aa15.61■□□□□ 0.09
NPHP4-206ENST00000468253 PGAM2P15259 253 aa15.6■□□□□ 0.09
NPHP4-206ENST00000468253 LPAR6P43657 344 aa15.6■□□□□ 0.09
NPHP4-206ENST00000468253 AP3S2P59780 193 aa15.6■□□□□ 0.09
NPHP4-206ENST00000468253 SCGB2B2Q4G0G5 96 aa15.6■□□□□ 0.09
NPHP4-206ENST00000468253 OR4A47Q6IF82 309 aa15.6■□□□□ 0.09
NPHP4-206ENST00000468253 C4orf3Q8WVX3 66 aa15.6■□□□□ 0.09
NPHP4-206ENST00000468253 SRSF12Q8WXF0 261 aaKnown RBP15.6■□□□□ 0.09
NPHP4-206ENST00000468253 NUDT19A8MXV4 375 aa15.59■□□□□ 0.09
NPHP4-206ENST00000468253 UPK2O00526 184 aa15.59■□□□□ 0.09
NPHP4-206ENST00000468253 B3GALNT1O75752 331 aa15.59■□□□□ 0.09
NPHP4-206ENST00000468253 CTSDP07339 412 aaPredicted RBP15.59■□□□□ 0.09
NPHP4-206ENST00000468253 RPL8P62917 257 aaKnown RBP15.59■□□□□ 0.09
NPHP4-206ENST00000468253 ZNF79Q15937 498 aa15.59■□□□□ 0.09
NPHP4-206ENST00000468253 ASPHD1Q5U4P2 390 aa15.59■□□□□ 0.09
NPHP4-206ENST00000468253 LCNL1Q6ZST4 164 aa15.59■□□□□ 0.09
NPHP4-206ENST00000468253 KLHL30-AS1Q8NEE0 82 aa15.59■□□□□ 0.09
NPHP4-206ENST00000468253 OR4C16Q8NGL9 310 aa15.59■□□□□ 0.09
NPHP4-206ENST00000468253 SCP2D1Q9UJQ7 156 aa15.59■□□□□ 0.09
NPHP4-206ENST00000468253 A6NHS1 94 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 S1PR2O95136 353 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 RPA2P15927 270 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 HLA-GP17693 338 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 PIGPP57054 158 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 ERVK-16P61578 105 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 C18orf65Q6ZTR6 163 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 C8orf86Q6ZUL3 223 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 SSX9Q7RTT3 188 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 SLC25A42Q86VD7 318 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 TTC9CQ8N5M4 171 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 OR5T1Q8NG75 326 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 MRGPRFQ96AM1 343 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 SCGB3A2Q96PL1 93 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 P2RX4Q99571 388 aa15.58■□□□□ 0.08
NPHP4-206ENST00000468253 I3L521 148 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 CCL24O00175 119 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 PF4P02776 101 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 FAUP35544 74 aaKnown RBP15.57■□□□□ 0.08
NPHP4-206ENST00000468253 RPL27AP46776 148 aaKnown RBP15.57■□□□□ 0.08
NPHP4-206ENST00000468253 KLF9Q13886 244 aaPredicted RBP15.57■□□□□ 0.08
NPHP4-206ENST00000468253 LINC00299Q6ZSB3 139 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 GDPD1Q8N9F7 314 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 CCDC71LQ8N9Z2 235 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 DMBX1Q8NFW5 382 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 OR51S1Q8NGJ8 323 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 OR13C8Q8NGS7 320 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 MARCH1Q8TCQ1 289 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 TRIM63Q969Q1 353 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 PHB2Q99623 299 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 HRASLSQ9HDD0 168 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 COPZ2Q9P299 210 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 GPR132Q9UNW8 380 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 NOTCH1P46531 2555 aa15.57■□□□□ 0.08
NPHP4-206ENST00000468253 A0A0G2JLM5 398 aa15.56■□□□□ 0.08
NPHP4-206ENST00000468253 MARCH11A6NNE9 402 aa15.56■□□□□ 0.08
NPHP4-206ENST00000468253 SERPINE2P07093 398 aa15.56■□□□□ 0.08
NPHP4-206ENST00000468253 OR9G9P0C7N8 305 aa15.56■□□□□ 0.08
NPHP4-206ENST00000468253 ETV3LQ6ZN32 361 aa15.56■□□□□ 0.08
NPHP4-206ENST00000468253 TOMM5Q8N4H5 51 aa15.56■□□□□ 0.08
NPHP4-206ENST00000468253 RAX2Q96IS3 184 aa15.56■□□□□ 0.08
NPHP4-206ENST00000468253 SRSF8Q9BRL6 282 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms