RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 HSD17B11Q8NBQ5 300 aa8.31□□□□□ -1.08
MSH5-213ENST00000468136 OR11H6Q8NGC7 330 aa8.31□□□□□ -1.08
MSH5-213ENST00000468136 OR2G3Q8NGZ4 309 aa8.31□□□□□ -1.08
MSH5-213ENST00000468136 PBDC1Q9BVG4 233 aa8.31□□□□□ -1.08
MSH5-213ENST00000468136 UQCC1Q9NVA1 299 aa8.31□□□□□ -1.08
MSH5-213ENST00000468136 TCF19Q9Y242 345 aa8.31□□□□□ -1.08
MSH5-213ENST00000468136 FBXO7Q9Y3I1 522 aa8.31□□□□□ -1.08
MSH5-213ENST00000468136 ACACBO00763 2458 aa8.31□□□□□ -1.08
MSH5-213ENST00000468136 SPTBN1Q01082 2364 aaKnown RBP8.3□□□□□ -1.08
MSH5-213ENST00000468136 A0A1B0GW64 132 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 A0A1W2PPE3 182 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 C17orf112F2Z3M2 114 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 LYNX1G3V0Z9 82 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 H7C2Y5 167 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 FOXH1O75593 365 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 METTL15P1P0C7V9 234 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 LYNX1P0DP58 116 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 MAS1LP35410 378 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 VDAC2P45880 294 aaPredicted RBP8.3□□□□□ -1.08
MSH5-213ENST00000468136 DLK1P80370 383 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 PRCDQ00LT1 54 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 TOR2AQ5JU69 321 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 AVPI1Q5T686 147 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 CCDC144NLQ6NUI1 221 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 BTNL8Q6UX41 500 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 CCDC28AQ8IWP9 274 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 TEX45Q8NA69 505 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 OR1L8Q8NGR8 309 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 TMEM167AQ8TBQ9 72 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 HARBI1Q96MB7 349 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 QTRT1Q9BXR0 403 aaKnown RBP8.3□□□□□ -1.08
MSH5-213ENST00000468136 MRPL20Q9BYC9 149 aaKnown RBP8.3□□□□□ -1.08
MSH5-213ENST00000468136 WDR61Q9GZS3 305 aaKnown RBP8.3□□□□□ -1.08
MSH5-213ENST00000468136 HEYLQ9NQ87 328 aaPredicted RBP8.3□□□□□ -1.08
MSH5-213ENST00000468136 OR51B2Q9Y5P1 312 aa8.3□□□□□ -1.08
MSH5-213ENST00000468136 TRAV1-1A0A0B4J248 108 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 H3BP45 60 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 BUB1B-PAK6H3BSN5 160 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 C19orf84I3L1E1 186 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 TSPAN15O95858 294 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 IFNA10P01566 189 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 IGHV3-7P01780 117 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 TAGLN2P37802 199 aaKnown RBP8.29□□□□□ -1.08
MSH5-213ENST00000468136 HOXA1P49639 335 aaPredicted RBP8.29□□□□□ -1.08
MSH5-213ENST00000468136 COMPP49747 757 aaPredicted RBP8.29□□□□□ -1.08
MSH5-213ENST00000468136 DSCR9P59020 149 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 RPL8P62917 257 aaKnown RBP8.29□□□□□ -1.08
MSH5-213ENST00000468136 TMEM267Q0VDI3 215 aaPredicted RBP8.29□□□□□ -1.08
MSH5-213ENST00000468136 PEA15Q15121 130 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 MINOS1Q5TGZ0 78 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 Q6ZRG5 221 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 C1orf229Q6ZS94 237 aaPredicted RBP8.29□□□□□ -1.08
MSH5-213ENST00000468136 SSX9Q7RTT3 188 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 ZNF709Q8N972 641 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 IGFBPL1Q8WX77 278 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 TAF15Q92804 592 aaKnown RBP eCLIP8.29□□□□□ -1.08
MSH5-213ENST00000468136 RPEQ96AT9 228 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 RBMXL1Q96E39 390 aaKnown RBP8.29□□□□□ -1.08
MSH5-213ENST00000468136 BSCL2Q96G97 398 aaPredicted RBP8.29□□□□□ -1.08
MSH5-213ENST00000468136 COMMD5Q9GZQ3 224 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 MS4A7Q9GZW8 240 aaPredicted RBP8.29□□□□□ -1.08
MSH5-213ENST00000468136 PLEKHA3Q9HB20 300 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 POLR3KQ9Y2Y1 108 aaPredicted RBP8.29□□□□□ -1.08
MSH5-213ENST00000468136 INSIG2Q9Y5U4 225 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 MINOS1-NBL1R4GNA1 71 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 MALRD1Q5VYJ5 2156 aa8.29□□□□□ -1.08
MSH5-213ENST00000468136 A0A1W2PPR1 153 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 C15orf62A8K5M9 175 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 PMS2P5A8MQ11 134 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 NDUFS6O75380 124 aaKnown RBP8.28□□□□□ -1.08
MSH5-213ENST00000468136 NXPH3O95157 252 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 IGHV2-5P01817 119 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 PAX1P15863 534 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 HTR1DP28221 377 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 CD1BP29016 333 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 SUB1P53999 127 aaKnown RBP eCLIP8.28□□□□□ -1.08
MSH5-213ENST00000468136 DVL1P1P54792 670 aaPredicted RBP8.28□□□□□ -1.08
MSH5-213ENST00000468136 RPS16P62249 146 aaKnown RBP8.28□□□□□ -1.08
MSH5-213ENST00000468136 ERHP84090 104 aaKnown RBP8.28□□□□□ -1.08
MSH5-213ENST00000468136 RAB31Q13636 194 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 PMS2P11Q13670 270 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 ETV3LQ6ZN32 361 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 MMD2Q8IY49 270 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 ZNF843Q8N446 348 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 SLC24A4Q8NFF2 622 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 PCNPQ8WW12 178 aaKnown RBP8.28□□□□□ -1.08
MSH5-213ENST00000468136 OR4C12Q96R67 309 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 SRSF8Q9BRL6 282 aaKnown RBP8.28□□□□□ -1.08
MSH5-213ENST00000468136 DPM3Q9P2X0 92 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 ONECUT1Q9UBC0 465 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 CACNA1BQ00975 2339 aa8.28□□□□□ -1.08
MSH5-213ENST00000468136 DOCK11Q5JSL3 2073 aa8.27□□□□□ -1.09
MSH5-213ENST00000468136 C22orf46C9J442 243 aa8.27□□□□□ -1.09
MSH5-213ENST00000468136 LY6LH3BQJ8 138 aa8.27□□□□□ -1.09
MSH5-213ENST00000468136 IGKV1-16P04430 117 aa8.27□□□□□ -1.09
MSH5-213ENST00000468136 H2AFB1P0C5Y9 115 aa8.27□□□□□ -1.09
MSH5-213ENST00000468136 SAA1P0DJI8 122 aaPredicted RBP8.27□□□□□ -1.09
MSH5-213ENST00000468136 NPY1RP25929 384 aa8.27□□□□□ -1.09
MSH5-213ENST00000468136 CDKN1AP38936 164 aa8.27□□□□□ -1.09
MSH5-213ENST00000468136 LINC00205P59089 165 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms