RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 MMD2Q8IY49 270 aa20.23■□□□□ 0.83
PDCD4-205ENST00000467574 VSTM2AQ8TAG5 236 aa20.23■□□□□ 0.83
PDCD4-205ENST00000467574 CASTOR1Q8WTX7 329 aa20.23■□□□□ 0.83
PDCD4-205ENST00000467574 SRSF12Q8WXF0 261 aaKnown RBP20.23■□□□□ 0.83
PDCD4-205ENST00000467574 TRIM63Q969Q1 353 aa20.23■□□□□ 0.83
PDCD4-205ENST00000467574 SLC2A9Q9NRM0 540 aa20.23■□□□□ 0.83
PDCD4-205ENST00000467574 NUDT19A8MXV4 375 aa20.22■□□□□ 0.83
PDCD4-205ENST00000467574 CREBL2O60519 120 aaPredicted RBP20.22■□□□□ 0.83
PDCD4-205ENST00000467574 RAB9AP51151 201 aa20.22■□□□□ 0.83
PDCD4-205ENST00000467574 PPP5CP53041 499 aa20.22■□□□□ 0.83
PDCD4-205ENST00000467574 MEF2DQ14814 521 aa20.22■□□□□ 0.83
PDCD4-205ENST00000467574 ZNF585BQ52M93 769 aa20.22■□□□□ 0.83
PDCD4-205ENST00000467574 OR4A47Q6IF82 309 aa20.22■□□□□ 0.83
PDCD4-205ENST00000467574 POC5Q8NA72 575 aa20.22■□□□□ 0.83
PDCD4-205ENST00000467574 OR5M8Q8NGP6 311 aa20.22■□□□□ 0.83
PDCD4-205ENST00000467574 TERB2Q8NHR7 220 aa20.22■□□□□ 0.83
PDCD4-205ENST00000467574 BET1LQ9NYM9 111 aa20.22■□□□□ 0.83
PDCD4-205ENST00000467574 COMMD9Q9P000 198 aa20.22■□□□□ 0.83
PDCD4-205ENST00000467574 IL6RP08887 468 aaPredicted RBP20.21■□□□□ 0.83
PDCD4-205ENST00000467574 AKAIN1P0CW23 69 aa20.21■□□□□ 0.83
PDCD4-205ENST00000467574 NQO2P16083 231 aa20.21■□□□□ 0.83
PDCD4-205ENST00000467574 ETV6P41212 452 aa20.21■□□□□ 0.83
PDCD4-205ENST00000467574 RND3P61587 244 aa20.21■□□□□ 0.83
PDCD4-205ENST00000467574 TBC1D26Q86UD7 250 aa20.21■□□□□ 0.83
PDCD4-205ENST00000467574 ZNF491Q8N8L2 437 aa20.21■□□□□ 0.83
PDCD4-205ENST00000467574 OR6Q1Q8NGQ2 317 aa20.21■□□□□ 0.83
PDCD4-205ENST00000467574 GNB4Q9HAV0 340 aa20.21■□□□□ 0.83
PDCD4-205ENST00000467574 PI3P19957 117 aa20.2■□□□□ 0.82
PDCD4-205ENST00000467574 SCGB2B2Q4G0G5 96 aa20.2■□□□□ 0.82
PDCD4-205ENST00000467574 TMEM65Q6PI78 240 aa20.2■□□□□ 0.82
PDCD4-205ENST00000467574 C4orf3Q8WVX3 66 aa20.2■□□□□ 0.82
PDCD4-205ENST00000467574 ZNF486Q96H40 463 aaPredicted RBP20.2■□□□□ 0.82
PDCD4-205ENST00000467574 RAX2Q96IS3 184 aa20.2■□□□□ 0.82
PDCD4-205ENST00000467574 UBE2E2Q96LR5 201 aa20.2■□□□□ 0.82
PDCD4-205ENST00000467574 A0A1B0GW64 132 aa20.19■□□□□ 0.82
PDCD4-205ENST00000467574 MSGN1A6NI15 193 aa20.19■□□□□ 0.82
PDCD4-205ENST00000467574 PF4P02776 101 aa20.19■□□□□ 0.82
PDCD4-205ENST00000467574 PGAM2P15259 253 aa20.19■□□□□ 0.82
PDCD4-205ENST00000467574 PTBP1P26599 531 aaKnown RBP eCLIP20.19■□□□□ 0.82
PDCD4-205ENST00000467574 DEFB136Q30KP8 78 aa20.19■□□□□ 0.82
PDCD4-205ENST00000467574 WFDC9Q8NEX5 89 aa20.19■□□□□ 0.82
PDCD4-205ENST00000467574 OR13C8Q8NGS7 320 aa20.19■□□□□ 0.82
PDCD4-205ENST00000467574 TMEM68Q96MH6 324 aa20.19■□□□□ 0.82
PDCD4-205ENST00000467574 P2RX4Q99571 388 aa20.19■□□□□ 0.82
PDCD4-205ENST00000467574 AIFM2Q9BRQ8 373 aa20.19■□□□□ 0.82
PDCD4-205ENST00000467574 THAP7Q9BT49 309 aaPredicted RBP20.19■□□□□ 0.82
PDCD4-205ENST00000467574 FAM212BQ9NTI7 297 aaPredicted RBP20.19■□□□□ 0.82
PDCD4-205ENST00000467574 APELAP0DMC3 54 aa20.18■□□□□ 0.82
PDCD4-205ENST00000467574 S100GP29377 79 aa20.18■□□□□ 0.82
PDCD4-205ENST00000467574 LPAR6P43657 344 aa20.18■□□□□ 0.82
PDCD4-205ENST00000467574 PYDC2Q56P42 97 aa20.18■□□□□ 0.82
PDCD4-205ENST00000467574 LINC00482Q8N8I6 264 aa20.18■□□□□ 0.82
PDCD4-205ENST00000467574 OR4A5Q8NH83 315 aa20.18■□□□□ 0.82
PDCD4-205ENST00000467574 DUX3Q96PT4 197 aa20.18■□□□□ 0.82
PDCD4-205ENST00000467574 TMEM140Q9NV12 185 aa20.18■□□□□ 0.82
PDCD4-205ENST00000467574 TRAV3A0A0B4J244 114 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 MARCH11A6NNE9 402 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 DISC1C4P0D8 188 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 TEX22C9J3V5 150 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 E7EUB6 86 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 ACTL6BO94805 426 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 MAS1LP35410 378 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 PIGPP57054 158 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 RPL8P62917 257 aaKnown RBP20.17■□□□□ 0.82
PDCD4-205ENST00000467574 KLF9Q13886 244 aaPredicted RBP20.17■□□□□ 0.82
PDCD4-205ENST00000467574 MRPL41Q8IXM3 137 aaKnown RBP20.17■□□□□ 0.82
PDCD4-205ENST00000467574 Q8N402 240 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 OR5T1Q8NG75 326 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 MARCH1Q8TCQ1 289 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 SLC2A8Q9NY64 477 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 VSIG4Q9Y279 399 aa20.17■□□□□ 0.82
PDCD4-205ENST00000467574 H3BUA1 57 aa20.16■□□□□ 0.82
PDCD4-205ENST00000467574 I3L521 148 aa20.16■□□□□ 0.82
PDCD4-205ENST00000467574 UPK2O00526 184 aa20.16■□□□□ 0.82
PDCD4-205ENST00000467574 MPPED1O15442 326 aa20.16■□□□□ 0.82
PDCD4-205ENST00000467574 MYOD1P15172 320 aa20.16■□□□□ 0.82
PDCD4-205ENST00000467574 MYCNOSP40205 109 aa20.16■□□□□ 0.82
PDCD4-205ENST00000467574 RUNX1Q01196 453 aa20.16■□□□□ 0.82
PDCD4-205ENST00000467574 ADAD2Q8NCV1 583 aaKnown RBP20.16■□□□□ 0.82
PDCD4-205ENST00000467574 MS4A10Q96PG2 267 aa20.16■□□□□ 0.82
PDCD4-205ENST00000467574 PHB2Q99623 299 aa20.16■□□□□ 0.82
PDCD4-205ENST00000467574 SRRQ9GZT4 340 aa20.16■□□□□ 0.82
PDCD4-205ENST00000467574 CCL24O00175 119 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 BRI3O95415 125 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 IGKV1-39P01597 117 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 IGKV1D-39P04432 117 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 RPA2P15927 270 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 HLA-GP17693 338 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 RPL27AP46776 148 aaKnown RBP20.15■□□□□ 0.82
PDCD4-205ENST00000467574 FHL3Q13643 280 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 SPANXN2Q5MJ10 180 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 CADM3Q8N126 398 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 DMBX1Q8NFW5 382 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 OR51S1Q8NGJ8 323 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 SPIN2AQ99865 258 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 SPIN2BQ9BPZ2 258 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 SLA2Q9H6Q3 261 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 HRASLSQ9HDD0 168 aa20.15■□□□□ 0.82
PDCD4-205ENST00000467574 CGB1A6NKQ9 187 aa20.14■□□□□ 0.81
PDCD4-205ENST00000467574 CTSDP07339 412 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms