RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PDLIM4P50479 330 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 GUCA2BQ16661 112 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 LY6G6FQ5SQ64 297 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 ZNF705AQ6ZN79 300 aaPredicted RBP11.6□□□□□ -0.55
BRAT1-203ENST00000467558 SSX7Q7RTT5 188 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 P2RX4Q99571 388 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 TNFRSF19Q9NS68 423 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 LTBP2Q14767 1821 aa11.59□□□□□ -0.55
BRAT1-203ENST00000467558 MBD3L4A6NDZ8 208 aaPredicted RBP11.59□□□□□ -0.55
BRAT1-203ENST00000467558 MBD3L3A6NE82 208 aaPredicted RBP11.59□□□□□ -0.55
BRAT1-203ENST00000467558 MBD3L5A6NJ08 208 aaPredicted RBP11.59□□□□□ -0.55
BRAT1-203ENST00000467558 C16orf82Q7Z2V1 217 aa11.59□□□□□ -0.55
BRAT1-203ENST00000467558 MBD3L2Q8NHZ7 208 aaPredicted RBP11.59□□□□□ -0.55
BRAT1-203ENST00000467558 MUC6Q6W4X9 2439 aa11.59□□□□□ -0.55
BRAT1-203ENST00000467558 KIAA1324LA8MWY0 1029 aaPredicted RBP11.59□□□□□ -0.55
BRAT1-203ENST00000467558 YPEL1O60688 119 aa11.59□□□□□ -0.55
BRAT1-203ENST00000467558 F12P00748 615 aaPredicted RBP11.59□□□□□ -0.55
BRAT1-203ENST00000467558 RANP62826 216 aaKnown RBP11.59□□□□□ -0.55
BRAT1-203ENST00000467558 LHFPL1Q86WI0 220 aa11.59□□□□□ -0.55
BRAT1-203ENST00000467558 PUSL1Q8N0Z8 303 aaKnown RBP11.59□□□□□ -0.55
BRAT1-203ENST00000467558 YPEL2Q96QA6 119 aa11.59□□□□□ -0.55
BRAT1-203ENST00000467558 TLNRD1Q9H1K6 362 aa11.59□□□□□ -0.55
BRAT1-203ENST00000467558 COL8A1P27658 744 aa11.59□□□□□ -0.55
BRAT1-203ENST00000467558 SRSF7Q16629 238 aaKnown RBP eCLIP11.59□□□□□ -0.55
BRAT1-203ENST00000467558 PCSK4Q6UW60 755 aa11.59□□□□□ -0.55
BRAT1-203ENST00000467558 OR4A5Q8NH83 315 aa11.59□□□□□ -0.55
BRAT1-203ENST00000467558 NOL4LQ96MY1 436 aaPredicted RBP11.59□□□□□ -0.55
BRAT1-203ENST00000467558 PROK2Q9HC23 129 aa11.59□□□□□ -0.55
BRAT1-203ENST00000467558 DNASE2O00115 360 aaPredicted RBP11.59□□□□□ -0.55
BRAT1-203ENST00000467558 SMIM17P0DL12 118 aa11.59□□□□□ -0.55
BRAT1-203ENST00000467558 MBNL2Q5VZF2 373 aaKnown RBP11.59□□□□□ -0.55
BRAT1-203ENST00000467558 CAMPP49913 170 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 RNFT1Q5M7Z0 435 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 MARVELD3Q96A59 401 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 SLC25A15Q9Y619 301 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 SRRM5B3KS81 715 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 P01737 135 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 ZNF880Q6PDB4 577 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 ZNF524Q96C55 264 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 TMPRSS5Q9H3S3 457 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 DPM3Q9P2X0 92 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 AP4M1O00189 453 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 FABP4P15090 132 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 FA2HQ7L5A8 372 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 C19orf24Q9BVV8 132 aa11.58□□□□□ -0.56
BRAT1-203ENST00000467558 FHITP49789 147 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 HLA-DRB5Q30154 266 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 OR5AU1Q8NGC0 362 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 DNAJC4Q9NNZ3 241 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 PITPNC1Q9UKF7 332 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 WISP1O95388 367 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 SLC16A13Q7RTY0 426 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 RPRMQ9NS64 109 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 NDUFB4O95168 129 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 HIST1H1EP10412 219 aaKnown RBP11.57□□□□□ -0.56
BRAT1-203ENST00000467558 TCL1AP56279 114 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 QRFPP83859 136 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 LDLRAD3Q86YD5 345 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 OR10D4PQ8NGN7 298 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 PLXNB3Q9ULL4 1909 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 RD3LP0DJH9 198 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 KRTDAPP60985 99 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 C18orf12Q96KH6 178 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 RNF126Q9BV68 326 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 GGACTQ9BVM4 153 aa11.57□□□□□ -0.56
BRAT1-203ENST00000467558 IGHV1-46P01743 117 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 PAX6P26367 422 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 OR4A47Q6IF82 309 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 UNQ5815/PRO19632Q6UWF5 114 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 ZCCHC24Q8N2G6 241 aaKnown RBP11.56□□□□□ -0.56
BRAT1-203ENST00000467558 C8orf88P0DMB2 117 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 PPOXP50336 477 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 MORN2Q502X0 79 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 LRTM2Q8N967 370 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 LHFPL5Q8TAF8 219 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 AURKAIP1Q9NWT8 199 aaPredicted RBP11.56□□□□□ -0.56
BRAT1-203ENST00000467558 ABCA4P78363 2273 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 KIAA1671Q9BY89 1806 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 FER1L5A0AVI2 2057 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 SEC14L6B5MCN3 397 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 LRP11Q86VZ4 500 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 BPIFA4PQ86YQ2 179 aa11.56□□□□□ -0.56
BRAT1-203ENST00000467558 RBM14Q96PK6 669 aaKnown RBP11.56□□□□□ -0.56
BRAT1-203ENST00000467558 NAPSAO96009 420 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 CA2P00918 260 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 PMCHP20382 165 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 MFAP4P55083 255 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 DTX1Q86Y01 620 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 GATAD1Q8WUU5 269 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 SSBP3Q9BWW4 388 aaPredicted RBP11.55□□□□□ -0.56
BRAT1-203ENST00000467558 TRAV30A0A087WSZ9 112 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 PHOX2AO14813 284 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 CRISP2P16562 243 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 CFPP27918 469 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 ZNF324BQ6AW86 544 aaPredicted RBP11.55□□□□□ -0.56
BRAT1-203ENST00000467558 RNF144BQ7Z419 303 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 NPIPB3Q92617 1050 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 CCL3L1P16619 93 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 RTN4RL2Q86UN3 420 aa11.55□□□□□ -0.56
BRAT1-203ENST00000467558 SGMS2Q8NHU3 365 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms