RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 PRELID3BQ9Y3B1 194 aa14.1□□□□□ -0.15
SRSF4-202ENST00000466448 S4R3C0 116 aa14.1□□□□□ -0.15
SRSF4-202ENST00000466448 TMEM213A2RRL7 107 aa14.09□□□□□ -0.15
SRSF4-202ENST00000466448 KBTBD11O94819 623 aa14.09□□□□□ -0.15
SRSF4-202ENST00000466448 NDUFB8O95169 186 aa14.09□□□□□ -0.15
SRSF4-202ENST00000466448 MAP2K4P45985 399 aa14.09□□□□□ -0.15
SRSF4-202ENST00000466448 ZNF57Q68EA5 555 aaPredicted RBP14.09□□□□□ -0.15
SRSF4-202ENST00000466448 PRSS48Q7RTY5 328 aa14.09□□□□□ -0.15
SRSF4-202ENST00000466448 FANCD2OSQ96PS1 177 aa14.09□□□□□ -0.15
SRSF4-202ENST00000466448 FYTTD1Q96QD9 318 aaKnown RBP14.09□□□□□ -0.15
SRSF4-202ENST00000466448 GGTLC1Q9BX51 225 aa14.09□□□□□ -0.15
SRSF4-202ENST00000466448 CCDC90BQ9GZT6 254 aa14.09□□□□□ -0.15
SRSF4-202ENST00000466448 MRPS7Q9Y2R9 242 aaKnown RBP14.09□□□□□ -0.15
SRSF4-202ENST00000466448 OR2W1Q9Y3N9 320 aa14.09□□□□□ -0.15
SRSF4-202ENST00000466448 TRAV1-2A0A0B4J238 106 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 ZNF320A2RRD8 509 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 DPPA5A6NC42 116 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 METTL21EPA6NDL7 271 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 A8MWP6 167 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 PDCD5O14737 125 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 HLA-DQB1P01920 261 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 AREGP15514 252 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 CD36P16671 472 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 NFYAP23511 347 aaPredicted RBP14.08□□□□□ -0.16
SRSF4-202ENST00000466448 DTYMKP23919 212 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 RPL27AP46776 148 aaKnown RBP14.08□□□□□ -0.16
SRSF4-202ENST00000466448 UXS1Q8NBZ7 420 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 OR52B4Q8NGK2 314 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 OR2A7Q96R45 310 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 SLC2A9Q9NRM0 540 aa14.08□□□□□ -0.16
SRSF4-202ENST00000466448 RRP15Q9Y3B9 282 aaKnown RBP14.08□□□□□ -0.16
SRSF4-202ENST00000466448 IGKV1D-13A0A0B4J2D9 117 aa14.07□□□□□ -0.16
SRSF4-202ENST00000466448 SCAF4O95104 1147 aaKnown RBP14.07□□□□□ -0.16
SRSF4-202ENST00000466448 CRYGCP07315 174 aa14.07□□□□□ -0.16
SRSF4-202ENST00000466448 ZNF735P0CB33 412 aa14.07□□□□□ -0.16
SRSF4-202ENST00000466448 IGKV1-13P0DP09 117 aa14.07□□□□□ -0.16
SRSF4-202ENST00000466448 BRWD1-AS2P59051 145 aa14.07□□□□□ -0.16
SRSF4-202ENST00000466448 SSX1Q16384 188 aa14.07□□□□□ -0.16
SRSF4-202ENST00000466448 PUSL1Q8N0Z8 303 aaKnown RBP14.07□□□□□ -0.16
SRSF4-202ENST00000466448 OR4S2Q8NH73 311 aa14.07□□□□□ -0.16
SRSF4-202ENST00000466448 VSTM2AQ8TAG5 236 aa14.07□□□□□ -0.16
SRSF4-202ENST00000466448 TMEM167AQ8TBQ9 72 aa14.07□□□□□ -0.16
SRSF4-202ENST00000466448 ST6GALNAC5Q9BVH7 336 aa14.07□□□□□ -0.16
SRSF4-202ENST00000466448 ATG5Q9H1Y0 275 aa14.07□□□□□ -0.16
SRSF4-202ENST00000466448 LOC102724200A0A096LPH7 203 aaPredicted RBP14.06□□□□□ -0.16
SRSF4-202ENST00000466448 LY6G6CO95867 125 aa14.06□□□□□ -0.16
SRSF4-202ENST00000466448 PSMB6P28072 239 aa14.06□□□□□ -0.16
SRSF4-202ENST00000466448 EIF4EBP1Q13541 118 aaPredicted RBP14.06□□□□□ -0.16
SRSF4-202ENST00000466448 PMS2P11Q13670 270 aa14.06□□□□□ -0.16
SRSF4-202ENST00000466448 FAM106AQ4KMX7 169 aa14.06□□□□□ -0.16
SRSF4-202ENST00000466448 BTNL8Q6UX41 500 aa14.06□□□□□ -0.16
SRSF4-202ENST00000466448 TCTEX1D2Q8WW35 142 aa14.06□□□□□ -0.16
SRSF4-202ENST00000466448 EEF1AKMT3Q96AZ1 226 aa14.06□□□□□ -0.16
SRSF4-202ENST00000466448 SPATA2Q9UM82 520 aa14.06□□□□□ -0.16
SRSF4-202ENST00000466448 CXorf65A6NEN9 183 aa14.05□□□□□ -0.16
SRSF4-202ENST00000466448 SLC22A5O76082 557 aa14.05□□□□□ -0.16
SRSF4-202ENST00000466448 CTXN2P0C2S0 81 aa14.05□□□□□ -0.16
SRSF4-202ENST00000466448 MAS1LP35410 378 aa14.05□□□□□ -0.16
SRSF4-202ENST00000466448 ARL6IP1Q15041 203 aa14.05□□□□□ -0.16
SRSF4-202ENST00000466448 KLK9Q2XQG4 91 aa14.05□□□□□ -0.16
SRSF4-202ENST00000466448 CDNFQ49AH0 187 aa14.05□□□□□ -0.16
SRSF4-202ENST00000466448 TM4SF20Q53R12 229 aa14.05□□□□□ -0.16
SRSF4-202ENST00000466448 UNQ9165/PRO28630Q6UXU0 137 aa14.05□□□□□ -0.16
SRSF4-202ENST00000466448 NR2C2APQ86WQ0 139 aa14.05□□□□□ -0.16
SRSF4-202ENST00000466448 HSD17B10Q99714 261 aaKnown RBP14.05□□□□□ -0.16
SRSF4-202ENST00000466448 KLK9Q9UKQ9 250 aa14.05□□□□□ -0.16
SRSF4-202ENST00000466448 MRPS14O60783 128 aaKnown RBP14.04□□□□□ -0.16
SRSF4-202ENST00000466448 DHFRP00374 187 aa14.04□□□□□ -0.16
SRSF4-202ENST00000466448 REG1AP05451 166 aa14.04□□□□□ -0.16
SRSF4-202ENST00000466448 MYOD1P15172 320 aa14.04□□□□□ -0.16
SRSF4-202ENST00000466448 CTRB1P17538 263 aa14.04□□□□□ -0.16
SRSF4-202ENST00000466448 RAB3BP20337 219 aa14.04□□□□□ -0.16
SRSF4-202ENST00000466448 MYL9P24844 172 aa14.04□□□□□ -0.16
SRSF4-202ENST00000466448 EWSR1Q01844 656 aaKnown RBP eCLIP14.04□□□□□ -0.163e-13■□□□□ 10.7
SRSF4-202ENST00000466448 ANKRD55Q3KP44 614 aa14.04□□□□□ -0.16
SRSF4-202ENST00000466448 HACD4Q5VWC8 232 aa14.04□□□□□ -0.16
SRSF4-202ENST00000466448 CTRB2Q6GPI1 263 aa14.04□□□□□ -0.16
SRSF4-202ENST00000466448 OR4A47Q6IF82 309 aa14.04□□□□□ -0.16
SRSF4-202ENST00000466448 DCSTAMPQ9H295 470 aa14.04□□□□□ -0.16
SRSF4-202ENST00000466448 TAS2R8Q9NYW2 309 aa14.04□□□□□ -0.16
SRSF4-202ENST00000466448 IGLV11-55A0A075B6I3 123 aa14.03□□□□□ -0.16
SRSF4-202ENST00000466448 A0A0J9YWU9 116 aa14.03□□□□□ -0.16
SRSF4-202ENST00000466448 MFSD2BA6NFX1 497 aa14.03□□□□□ -0.16
SRSF4-202ENST00000466448 CGB1A6NKQ9 187 aa14.03□□□□□ -0.16
SRSF4-202ENST00000466448 CLEC3BP05452 202 aa14.03□□□□□ -0.16
SRSF4-202ENST00000466448 HIST1H1BP16401 226 aaKnown RBP14.03□□□□□ -0.16
SRSF4-202ENST00000466448 GABARAPL2P60520 117 aa14.03□□□□□ -0.16
SRSF4-202ENST00000466448 RPL8P62917 257 aaKnown RBP14.03□□□□□ -0.16
SRSF4-202ENST00000466448 TBCEQ15813 527 aaPredicted RBP14.03□□□□□ -0.16
SRSF4-202ENST00000466448 SSX9Q7RTT3 188 aa14.03□□□□□ -0.16
SRSF4-202ENST00000466448 MFSD4AQ8N468 514 aa14.03□□□□□ -0.16
SRSF4-202ENST00000466448 NUDCD2Q8WVJ2 157 aa14.03□□□□□ -0.16
SRSF4-202ENST00000466448 GPHA2Q96T91 129 aa14.03□□□□□ -0.16
SRSF4-202ENST00000466448 YTHDF1Q9BYJ9 559 aaKnown RBP14.03□□□□□ -0.16
SRSF4-202ENST00000466448 NDUFB11Q9NX14 153 aa14.03□□□□□ -0.16
SRSF4-202ENST00000466448 TRBV7-1A0A0A6YYK4 115 aa14.02□□□□□ -0.17
SRSF4-202ENST00000466448 SMIM30A4D0T7 59 aa14.02□□□□□ -0.17
SRSF4-202ENST00000466448 C8orf88P0DMB2 117 aa14.02□□□□□ -0.17
SRSF4-202ENST00000466448 DEFA4P12838 97 aa14.02□□□□□ -0.17
SRSF4-202ENST00000466448 HLA-GP17693 338 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms