RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 REG1AP05451 166 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 PSMD7P51665 324 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 GUCA2BQ16661 112 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 TATDN3Q17R31 274 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 MMD2Q8IY49 270 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 PUSL1Q8N0Z8 303 aaKnown RBP15.47■□□□□ 0.07
COL6A1-203ENST00000466285 FYTTD1Q96QD9 318 aaKnown RBP15.47■□□□□ 0.07
COL6A1-203ENST00000466285 SPIN2AQ99865 258 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 SPIN2BQ9BPZ2 258 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 Q9H521 79 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 TAS2R8Q9NYW2 309 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 OR2W1Q9Y3N9 320 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 FRAS1Q86XX4 4008 aa15.46■□□□□ 0.07
COL6A1-203ENST00000466285 TMEM213A2RRL7 107 aa15.46■□□□□ 0.07
COL6A1-203ENST00000466285 HACD4Q5VWC8 232 aa15.46■□□□□ 0.07
COL6A1-203ENST00000466285 SSX9Q7RTT3 188 aa15.46■□□□□ 0.07
COL6A1-203ENST00000466285 TMEM61Q8N0U2 210 aa15.46■□□□□ 0.07
COL6A1-203ENST00000466285 LGALS14Q8TCE9 139 aa15.46■□□□□ 0.07
COL6A1-203ENST00000466285 TCTEX1D2Q8WW35 142 aa15.46■□□□□ 0.07
COL6A1-203ENST00000466285 MLXQ9UH92 298 aa15.46■□□□□ 0.07
COL6A1-203ENST00000466285 FBXL7Q9UJT9 491 aa15.46■□□□□ 0.07
COL6A1-203ENST00000466285 SPATA2Q9UM82 520 aa15.46■□□□□ 0.07
COL6A1-203ENST00000466285 MFSD2BA6NFX1 497 aa15.45■□□□□ 0.06
COL6A1-203ENST00000466285 OR11H12B2RN74 326 aa15.45■□□□□ 0.06
COL6A1-203ENST00000466285 AIREO43918 545 aa15.45■□□□□ 0.06
COL6A1-203ENST00000466285 ACTL6BO94805 426 aa15.45■□□□□ 0.06
COL6A1-203ENST00000466285 KIR2DS2P43631 304 aa15.45■□□□□ 0.06
COL6A1-203ENST00000466285 RPL27AP46776 148 aaKnown RBP15.45■□□□□ 0.06
COL6A1-203ENST00000466285 CLEC19AQ6UXS0 136 aa15.45■□□□□ 0.06
COL6A1-203ENST00000466285 ZNF257Q9Y2Q1 563 aa15.45■□□□□ 0.06
COL6A1-203ENST00000466285 METTL21EPA6NDL7 271 aa15.44■□□□□ 0.06
COL6A1-203ENST00000466285 NPIPB5A8MRT5 1133 aa15.44■□□□□ 0.06
COL6A1-203ENST00000466285 TNFSF12O43508 249 aa15.44■□□□□ 0.06
COL6A1-203ENST00000466285 ZNF735P0CB33 412 aa15.44■□□□□ 0.06
COL6A1-203ENST00000466285 LAX1Q8IWV1 398 aa15.44■□□□□ 0.06
COL6A1-203ENST00000466285 TMEM167AQ8TBQ9 72 aa15.44■□□□□ 0.06
COL6A1-203ENST00000466285 OR51E2Q9H255 320 aa15.44■□□□□ 0.06
COL6A1-203ENST00000466285 GGCTO75223 188 aaKnown RBP15.43■□□□□ 0.06
COL6A1-203ENST00000466285 FCER2P06734 321 aa15.43■□□□□ 0.06
COL6A1-203ENST00000466285 CD36P16671 472 aa15.43■□□□□ 0.06
COL6A1-203ENST00000466285 ARL3P36405 182 aa15.43■□□□□ 0.06
COL6A1-203ENST00000466285 ZNF773Q6PK81 442 aa15.43■□□□□ 0.06
COL6A1-203ENST00000466285 UNQ9165/PRO28630Q6UXU0 137 aa15.43■□□□□ 0.06
COL6A1-203ENST00000466285 OR4S2Q8NH73 311 aa15.43■□□□□ 0.06
COL6A1-203ENST00000466285 KCTD12Q96CX2 325 aaKnown RBP15.43■□□□□ 0.06
COL6A1-203ENST00000466285 TXNL4BQ9NX01 149 aaKnown RBP15.43■□□□□ 0.06
COL6A1-203ENST00000466285 SLC2A8Q9NY64 477 aa15.43■□□□□ 0.06
COL6A1-203ENST00000466285 MRPS7Q9Y2R9 242 aaKnown RBP15.43■□□□□ 0.06
COL6A1-203ENST00000466285 TRAV3A0A0B4J244 114 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 LGALS9O00182 355 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 CLEC2LP0C7M8 214 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 CBLN1P23435 193 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 EWSR1Q01844 656 aaKnown RBP eCLIP15.42■□□□□ 0.06
COL6A1-203ENST00000466285 CNIH2Q6PI25 160 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 GVQW1Q8N7I0 195 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 OR5H6Q8NGV6 325 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 SLC25A38Q96DW6 304 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 OR2A7Q96R45 310 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 YTHDF1Q9BYJ9 559 aaKnown RBP15.42■□□□□ 0.06
COL6A1-203ENST00000466285 RNF167Q9H6Y7 350 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 CCL28Q9NRJ3 127 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 SLC2A9Q9NRM0 540 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 DAPK2Q9UIK4 370 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 ANXA10Q9UJ72 324 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 PRELID3BQ9Y3B1 194 aa15.42■□□□□ 0.06
COL6A1-203ENST00000466285 IGLV11-55A0A075B6I3 123 aa15.41■□□□□ 0.06
COL6A1-203ENST00000466285 NOTOA8MTQ0 251 aa15.41■□□□□ 0.06
COL6A1-203ENST00000466285 CREBL2O60519 120 aaPredicted RBP15.41■□□□□ 0.06
COL6A1-203ENST00000466285 SCAF4O95104 1147 aaKnown RBP15.41■□□□□ 0.06
COL6A1-203ENST00000466285 CRYGCP07315 174 aa15.41■□□□□ 0.06
COL6A1-203ENST00000466285 CTRB1P17538 263 aa15.41■□□□□ 0.06
COL6A1-203ENST00000466285 PSMB6P28072 239 aa15.41■□□□□ 0.06
COL6A1-203ENST00000466285 CTRB2Q6GPI1 263 aa15.41■□□□□ 0.06
COL6A1-203ENST00000466285 BTNL8Q6UX41 500 aa15.41■□□□□ 0.06
COL6A1-203ENST00000466285 MFSD4AQ8N468 514 aa15.41■□□□□ 0.06
COL6A1-203ENST00000466285 IGHV3-35A0A0C4DH35 117 aa15.4■□□□□ 0.06
COL6A1-203ENST00000466285 A8MWP6 167 aa15.4■□□□□ 0.06
COL6A1-203ENST00000466285 GNG2P59768 71 aa15.4■□□□□ 0.06
COL6A1-203ENST00000466285 GABARAPL2P60520 117 aa15.4■□□□□ 0.06
COL6A1-203ENST00000466285 TIMM50Q3ZCQ8 353 aa15.4■□□□□ 0.06
COL6A1-203ENST00000466285 TM4SF20Q53R12 229 aa15.4■□□□□ 0.06
COL6A1-203ENST00000466285 OR4A47Q6IF82 309 aa15.4■□□□□ 0.06
COL6A1-203ENST00000466285 HSD17B10Q99714 261 aaKnown RBP15.4■□□□□ 0.06
COL6A1-203ENST00000466285 PSMB9P28065 219 aa15.39■□□□□ 0.05
COL6A1-203ENST00000466285 KLK9Q2XQG4 91 aa15.39■□□□□ 0.05
COL6A1-203ENST00000466285 UBE2UQ5VVX9 321 aa15.39■□□□□ 0.05
COL6A1-203ENST00000466285 SFXN4Q6P4A7 337 aa15.39■□□□□ 0.05
COL6A1-203ENST00000466285 GPHB5Q86YW7 130 aa15.39■□□□□ 0.05
COL6A1-203ENST00000466285 UXS1Q8NBZ7 420 aa15.39■□□□□ 0.05
COL6A1-203ENST00000466285 SECTM1Q8WVN6 248 aa15.39■□□□□ 0.05
COL6A1-203ENST00000466285 DCSTAMPQ9H295 470 aa15.39■□□□□ 0.05
COL6A1-203ENST00000466285 RHBDL2Q9NX52 303 aa15.39■□□□□ 0.05
COL6A1-203ENST00000466285 KLK9Q9UKQ9 250 aa15.39■□□□□ 0.05
COL6A1-203ENST00000466285 KMT2AQ03164 3969 aa15.38■□□□□ 0.05
COL6A1-203ENST00000466285 IGLC7A0M8Q6 106 aa15.38■□□□□ 0.05
COL6A1-203ENST00000466285 ZNF320A2RRD8 509 aa15.38■□□□□ 0.05
COL6A1-203ENST00000466285 DPPA5A6NC42 116 aa15.38■□□□□ 0.05
COL6A1-203ENST00000466285 MRPS14O60783 128 aaKnown RBP15.38■□□□□ 0.05
COL6A1-203ENST00000466285 JTBO76095 146 aa15.38■□□□□ 0.05
COL6A1-203ENST00000466285 CTXN2P0C2S0 81 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms