RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 HCP5Q6MZN7 132 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 PQLC2Q6ZP29 291 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 MSRB3Q8IXL7 192 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 ISG20L2Q9H9L3 353 aaKnown RBP7.88□□□□□ -1.15
SCAF11-205ENST00000465950 FRRS1LQ9P0K9 344 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 UPK2O00526 184 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 HSPB1P04792 205 aaKnown RBP7.88□□□□□ -1.15
SCAF11-205ENST00000465950 PRSS12P56730 875 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 NCOR1O75376 2440 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 A0A1B0GTL3 188 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 TMEM189A5PLL7 270 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 CXorf1O96002 111 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 PRR27Q6MZM9 219 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 GBGT1Q8N5D6 347 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 IGHV3-11P01762 117 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 ZNF688P0C7X2 276 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 ZNF14P17017 642 aaPredicted RBP7.88□□□□□ -1.15
SCAF11-205ENST00000465950 P2RY1P47900 373 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 RANP62826 216 aaKnown RBP7.88□□□□□ -1.15
SCAF11-205ENST00000465950 SNAI3Q3KNW1 292 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 TNFRSF18Q9Y5U5 241 aa7.88□□□□□ -1.15
SCAF11-205ENST00000465950 P01737 135 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 BRD3OSQ6XYD6 125 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 KLHDC1Q8N7A1 406 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 WDR89Q96FK6 387 aaPredicted RBP7.87□□□□□ -1.15
SCAF11-205ENST00000465950 TDRD6O60522 2096 aaKnown RBP7.87□□□□□ -1.15
SCAF11-205ENST00000465950 CACNA1HO95180 2353 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 MEX3AA1L020 520 aaKnown RBP7.87□□□□□ -1.15
SCAF11-205ENST00000465950 NDUFB6O95139 128 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 SNAPINO95295 136 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 COL8A1P27658 744 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 ADORA2A-AS1P86434 159 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 MST1LQ2TV78 715 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 FAM78BQ5VT40 261 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 C2CD4CQ8TF44 421 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 YIPF5Q969M3 257 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 MBD6Q96DN6 1003 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 NEU1Q99519 415 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 GGACTQ9BVM4 153 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 SMAD5-AS1Q9Y6J3 95 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 ABCA4P78363 2273 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 TRBV5-3A0A0A0MS03 114 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 OTPQ5XKR4 325 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 ADAT3Q96EY9 351 aaPredicted RBP7.87□□□□□ -1.15
SCAF11-205ENST00000465950 IGKV1D-42A0A075B6H8 117 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 COL8A2P25067 703 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 ADIRFQ15847 76 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 USF2Q15853 346 aaPredicted RBP7.87□□□□□ -1.15
SCAF11-205ENST00000465950 PRSS53Q2L4Q9 553 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 TUSC1Q2TAM9 212 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 OR2C3Q8N628 320 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 ZNF439Q8NDP4 499 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 OR4C16Q8NGL9 310 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 SRSF12Q8WXF0 261 aaKnown RBP7.87□□□□□ -1.15
SCAF11-205ENST00000465950 CFAP161Q6P656 301 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 ZNF429Q86V71 674 aa7.87□□□□□ -1.15
SCAF11-205ENST00000465950 LINC00869P0C866 280 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 CCL3L1P16619 93 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 SULT1A1P50225 295 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 SULT1A2P50226 295 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 DAD1P61803 113 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 CX3CL1P78423 397 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 C1orf100Q5SVJ3 147 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 MRPS18AQ9NVS2 196 aaKnown RBP7.86□□□□□ -1.15
SCAF11-205ENST00000465950 CSAG2Q9Y5P2 127 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 PQLC2LA1A4F0 135 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 FAM90A9PA6NNJ1 464 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 IL4P05112 153 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 VSIG8P0DPA2 414 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 OR10G4Q8NGN3 311 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 OR10G9Q8NGN4 311 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 OR10G7Q8NGN6 311 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 TMEM89A2RUT3 159 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 ASIPP42127 132 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 DLK1P80370 383 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 TMEM179BQ7Z7N9 219 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 GATAD1Q8WUU5 269 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 FAM215AQ9Y5M1 114 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 C4orf51C9J302 202 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 IGHV2-5P01817 119 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 POLR2IP36954 125 aaKnown RBP7.86□□□□□ -1.15
SCAF11-205ENST00000465950 RPL13AP40429 203 aaKnown RBP7.86□□□□□ -1.15
SCAF11-205ENST00000465950 FABP5Q01469 135 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 C5orf64Q2M2E5 130 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 ASCL4Q6XD76 172 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 RTN4RQ9BZR6 473 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 SLC2A9Q9NRM0 540 aa7.86□□□□□ -1.15
SCAF11-205ENST00000465950 ZNF230Q9UIE0 474 aaPredicted RBP7.86□□□□□ -1.15
SCAF11-205ENST00000465950 CACNA1IQ9P0X4 2223 aa7.85□□□□□ -1.15
SCAF11-205ENST00000465950 HOXA3O43365 443 aaPredicted RBP7.85□□□□□ -1.15
SCAF11-205ENST00000465950 SH2D6Q7Z4S9 175 aa7.85□□□□□ -1.15
SCAF11-205ENST00000465950 SEC16AO15027 2179 aa7.85□□□□□ -1.15
SCAF11-205ENST00000465950 KIAA1671Q9BY89 1806 aa7.85□□□□□ -1.15
SCAF11-205ENST00000465950 ZNF705GA8MUZ8 300 aaPredicted RBP7.85□□□□□ -1.15
SCAF11-205ENST00000465950 EMP1P54849 157 aa7.85□□□□□ -1.15
SCAF11-205ENST00000465950 ERVS71-1P61550 626 aa7.85□□□□□ -1.15
SCAF11-205ENST00000465950 ZNF585BQ52M93 769 aa7.85□□□□□ -1.15
SCAF11-205ENST00000465950 DMRTC1Q5HYR2 192 aa7.85□□□□□ -1.15
SCAF11-205ENST00000465950 MORN3Q6PF18 240 aaPredicted RBP7.85□□□□□ -1.15
SCAF11-205ENST00000465950 OR2K2Q8NGT1 345 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms