RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 C3orf85A0A1B0GTC6 90 aa14.43□□□□□ -0.1
HOXA9-203ENST00000465941 NAP1L6A6NFF2 107 aa14.43□□□□□ -0.1
HOXA9-203ENST00000465941 G3V318 75 aa14.43□□□□□ -0.1
HOXA9-203ENST00000465941 H0Y980 276 aa14.43□□□□□ -0.1
HOXA9-203ENST00000465941 B3GALNT1O75752 331 aa14.43□□□□□ -0.1
HOXA9-203ENST00000465941 IGHG4P01861 327 aa14.43□□□□□ -0.1
HOXA9-203ENST00000465941 PPIFP30405 207 aaKnown RBP14.43□□□□□ -0.1
HOXA9-203ENST00000465941 GNB1P62873 340 aa14.43□□□□□ -0.1
HOXA9-203ENST00000465941 OR4A47Q6IF82 309 aa14.43□□□□□ -0.1
HOXA9-203ENST00000465941 SSX9Q7RTT3 188 aa14.43□□□□□ -0.1
HOXA9-203ENST00000465941 MINDY2Q8NBR6 621 aa14.43□□□□□ -0.1
HOXA9-203ENST00000465941 R3HDM4Q96D70 268 aa14.43□□□□□ -0.1
HOXA9-203ENST00000465941 CITED2Q99967 270 aaPredicted RBP14.43□□□□□ -0.1
HOXA9-203ENST00000465941 SLC25A21Q9BQT8 299 aaPredicted RBP14.43□□□□□ -0.1
HOXA9-203ENST00000465941 CCDC32Q9BV29 185 aa14.43□□□□□ -0.1
HOXA9-203ENST00000465941 SERPINE2P07093 398 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 FGF2P09038 288 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 RPA2P15927 270 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 CD40LGP29965 261 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 MAS1LP35410 378 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 ERVK-16P61578 105 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 FOXE3Q13461 319 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 TNXAQ16473 311 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 NDUFA11Q86Y39 141 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 RNF152Q8N8N0 203 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 DMBX1Q8NFW5 382 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 GRPEL2Q8TAA5 225 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 ABHD5Q8WTS1 349 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 TP53RKQ96S44 253 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 C7orf50Q9BRJ6 194 aaKnown RBP14.42□□□□□ -0.1
HOXA9-203ENST00000465941 FAM103A1Q9BTL3 118 aaKnown RBP14.42□□□□□ -0.1
HOXA9-203ENST00000465941 VSIG4Q9Y279 399 aa14.42□□□□□ -0.1
HOXA9-203ENST00000465941 TCRBV4S1A1TA0A5B7 111 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 MARCH11A6NNE9 402 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 ACTL6BO94805 426 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 KRASP01116 189 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 IGLV1-40P01703 118 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 OPN1MWP04001 364 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 ELANEP08246 267 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 OPN1MW2P0DN77 364 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 OPN1MW3P0DN78 364 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 HIST2H2BDQ6DRA6 164 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 LFNGQ8NES3 379 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 TMEM68Q96MH6 324 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 TMEM140Q9NV12 185 aa14.41□□□□□ -0.1
HOXA9-203ENST00000465941 TSSC4Q9Y5U2 329 aaPredicted RBP14.41□□□□□ -0.1
HOXA9-203ENST00000465941 TEX13DA0A0J9YY54 714 aaPredicted RBP14.4□□□□□ -0.1
HOXA9-203ENST00000465941 MSGN1A6NI15 193 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 CRYM-AS1A6NIL9 109 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 CENPXA8MT69 81 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 ADARB2-AS1A8MUL3 147 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 UPK2O00526 184 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 IGKV1-39P01597 117 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 IGKV1D-39P04432 117 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 PSMB8P28062 276 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 G6PCP35575 357 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 RPL8P62917 257 aaKnown RBP14.4□□□□□ -0.1
HOXA9-203ENST00000465941 ZNF846Q147U1 533 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 ECSCRQ19T08 205 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 UNQ5815/PRO19632Q6UWF5 114 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 SRSF12Q8WXF0 261 aaKnown RBP14.4□□□□□ -0.1
HOXA9-203ENST00000465941 WDR12Q9GZL7 423 aaKnown RBP14.4□□□□□ -0.1
HOXA9-203ENST00000465941 NAA60Q9H7X0 242 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 ZFP57Q9NU63 452 aa14.4□□□□□ -0.1
HOXA9-203ENST00000465941 FOXA2Q9Y261 457 aaPredicted RBP14.4□□□□□ -0.1
HOXA9-203ENST00000465941 LINC00854A0A1B0GVQ3 168 aa14.39□□□□□ -0.11
HOXA9-203ENST00000465941 M0QZ24 198 aa14.39□□□□□ -0.11
HOXA9-203ENST00000465941 HLA-GP17693 338 aa14.39□□□□□ -0.11
HOXA9-203ENST00000465941 UCP1P25874 307 aa14.39□□□□□ -0.11
HOXA9-203ENST00000465941 SP6Q3SY56 376 aa14.39□□□□□ -0.11
HOXA9-203ENST00000465941 CXorf66Q5JRM2 361 aaPredicted RBP14.39□□□□□ -0.11
HOXA9-203ENST00000465941 ADAD2Q8NCV1 583 aaKnown RBP14.39□□□□□ -0.11
HOXA9-203ENST00000465941 TMEM230Q96A57 120 aa14.39□□□□□ -0.11
HOXA9-203ENST00000465941 SEC22AQ96IW7 307 aa14.39□□□□□ -0.11
HOXA9-203ENST00000465941 SPIN2AQ99865 258 aa14.39□□□□□ -0.11
HOXA9-203ENST00000465941 SPIN2BQ9BPZ2 258 aa14.39□□□□□ -0.11
HOXA9-203ENST00000465941 TRAV3A0A0B4J244 114 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 A0A1W2PN81 502 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 PLA2G10O15496 165 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 SOX15O60248 233 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 CHRNA7P36544 502 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 CCR6P51684 374 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 RBMS2Q15434 407 aaKnown RBP14.38□□□□□ -0.11
HOXA9-203ENST00000465941 C2orf68Q2NKX9 166 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 SGPP2Q8IWX5 399 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 OR5M8Q8NGP6 311 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 GLYATL2Q8WU03 294 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 GALNT14Q96FL9 552 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 TMEM222Q9H0R3 208 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 KCNIP3Q9Y2W7 256 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 ANK2Q01484 3957 aa14.38□□□□□ -0.11
HOXA9-203ENST00000465941 FBN3Q75N90 2809 aa14.37□□□□□ -0.11
HOXA9-203ENST00000465941 ATG12O94817 140 aa14.37□□□□□ -0.11
HOXA9-203ENST00000465941 CDS2O95674 445 aa14.37□□□□□ -0.11
HOXA9-203ENST00000465941 OR5AC1P0C628 307 aa14.37□□□□□ -0.11
HOXA9-203ENST00000465941 AKR1C4P17516 323 aa14.37□□□□□ -0.11
HOXA9-203ENST00000465941 DHODHQ02127 395 aa14.37□□□□□ -0.11
HOXA9-203ENST00000465941 NSUN5P1Q3KNT7 163 aa14.37□□□□□ -0.11
HOXA9-203ENST00000465941 PRR31Q5SQ13 230 aa14.37□□□□□ -0.11
HOXA9-203ENST00000465941 C10orf55Q5SWW7 151 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms