RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 ZNF695Q8IW36 515 aa11.66□□□□□ -0.54
HLA-F-223ENST00000465459 FAM219AQ8IW50 185 aa11.66□□□□□ -0.54
HLA-F-223ENST00000465459 MMD2Q8IY49 270 aa11.66□□□□□ -0.54
HLA-F-223ENST00000465459 VKORC1L1Q8N0U8 176 aa11.66□□□□□ -0.54
HLA-F-223ENST00000465459 OR4F5Q8NH21 305 aa11.66□□□□□ -0.54
HLA-F-223ENST00000465459 OR2T6Q8NHC8 308 aa11.66□□□□□ -0.54
HLA-F-223ENST00000465459 ZNF702PQ9H963 129 aa11.66□□□□□ -0.54
HLA-F-223ENST00000465459 TMEM140Q9NV12 185 aa11.66□□□□□ -0.54
HLA-F-223ENST00000465459 ZNF580Q9UK33 172 aa11.66□□□□□ -0.54
HLA-F-223ENST00000465459 CUBNO60494 3623 aa11.66□□□□□ -0.54
HLA-F-223ENST00000465459 INMT-MINDY4F8WBC2 141 aa11.65□□□□□ -0.54
HLA-F-223ENST00000465459 PRAF2O60831 178 aa11.65□□□□□ -0.54
HLA-F-223ENST00000465459 HLA-AP01891 365 aaKnown RBP11.65□□□□□ -0.54
HLA-F-223ENST00000465459 IL5P05113 134 aa11.65□□□□□ -0.54
HLA-F-223ENST00000465459 G6PCP35575 357 aa11.65□□□□□ -0.54
HLA-F-223ENST00000465459 RAB25P57735 213 aa11.65□□□□□ -0.54
HLA-F-223ENST00000465459 RELBQ01201 579 aa11.65□□□□□ -0.54
HLA-F-223ENST00000465459 H2BFWTQ7Z2G1 175 aa11.65□□□□□ -0.54
HLA-F-223ENST00000465459 SELENOHQ8IZQ5 122 aaKnown RBP11.65□□□□□ -0.54
HLA-F-223ENST00000465459 TMEM158Q8WZ71 300 aa11.65□□□□□ -0.54
HLA-F-223ENST00000465459 LSM10Q969L4 123 aaKnown RBP11.65□□□□□ -0.54
HLA-F-223ENST00000465459 RRNAD1Q96FB5 475 aaKnown RBP11.65□□□□□ -0.54
HLA-F-223ENST00000465459 MMP24Q9Y5R2 645 aa11.65□□□□□ -0.54
HLA-F-223ENST00000465459 A0A0B4J2A0 478 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 UPK2O00526 184 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 FCN1O00602 326 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 SNAPC5O75971 98 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 ACTL6BO94805 426 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 DHFRP00374 187 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 VDAC1P21796 283 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 AKR1C2P52895 323 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 RPL8P62917 257 aaKnown RBP11.64□□□□□ -0.55
HLA-F-223ENST00000465459 CX3CL1P78423 397 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 SRSF2Q01130 221 aaKnown RBP11.64□□□□□ -0.55
HLA-F-223ENST00000465459 FOXL1Q12952 345 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 MRGPRG-AS1Q2M3A8 158 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 C9orf152Q5JTZ5 239 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 TMEM268Q5VZI3 342 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 SSX9Q7RTT3 188 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 SLC35E3Q7Z769 313 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 COQ8AQ8NI60 647 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 LHFPL5Q8TAF8 219 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 MITD1Q8WV92 249 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 OR51J1Q9H342 316 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 ZNF430Q9H8G1 570 aaPredicted RBP11.64□□□□□ -0.55
HLA-F-223ENST00000465459 BEX1Q9HBH7 125 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 TPSG1Q9NRR2 321 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 FKBP11Q9NYL4 201 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 SHPKQ9UHJ6 478 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 TNCP24821 2201 aa11.64□□□□□ -0.55
HLA-F-223ENST00000465459 IGHV7-81A0A0B4J1V7 117 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 TMEM89A2RUT3 159 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 AP4M1O00189 453 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 CA2P00918 260 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 IGKV1-5P01602 117 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 IGF1P05019 195 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 P0C879 139 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 ANKRD55Q3KP44 614 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 FOXRED2Q8IWF2 684 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.63□□□□□ -0.55
HLA-F-223ENST00000465459 ZNF431Q8TF32 576 aaPredicted RBP11.63□□□□□ -0.55
HLA-F-223ENST00000465459 CASTOR1Q8WTX7 329 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 PHB2Q99623 299 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 GPN1Q9HCN4 374 aaPredicted RBP11.63□□□□□ -0.55
HLA-F-223ENST00000465459 CACFD1Q9UGQ2 172 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 PRNDQ9UKY0 176 aa11.63□□□□□ -0.55
HLA-F-223ENST00000465459 SH2D7A6NKC9 451 aaPredicted RBP11.62□□□□□ -0.55
HLA-F-223ENST00000465459 SNRPGP15A8MWD9 76 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 CNIH1O95406 144 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 HLA-GP17693 338 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 VDAC2P45880 294 aaPredicted RBP11.62□□□□□ -0.55
HLA-F-223ENST00000465459 COMPP49747 757 aaPredicted RBP11.62□□□□□ -0.55
HLA-F-223ENST00000465459 CRIP2P52943 208 aaPredicted RBP11.62□□□□□ -0.55
HLA-F-223ENST00000465459 PJVKQ0ZLH3 352 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 FXYD3Q14802 87 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 KRTAP24-1Q3LI83 254 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 ARSJQ5FYB0 599 aaPredicted RBP11.62□□□□□ -0.55
HLA-F-223ENST00000465459 Q6ZS46 218 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 SLC35G3Q8N808 338 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 MINDY2Q8NBR6 621 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 LINC01006Q8NI28 216 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 RNASE11Q8TAA1 199 aaKnown RBP11.62□□□□□ -0.55
HLA-F-223ENST00000465459 CLCC1Q96S66 551 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 HSPB9Q9BQS6 159 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 GON7Q9BXV9 100 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 TMED3Q9Y3Q3 217 aa11.62□□□□□ -0.55
HLA-F-223ENST00000465459 CLPSL1A2RUU4 121 aa11.61□□□□□ -0.55
HLA-F-223ENST00000465459 SLC25A6P12236 298 aa11.61□□□□□ -0.55
HLA-F-223ENST00000465459 SPNP16150 400 aa11.61□□□□□ -0.55
HLA-F-223ENST00000465459 TMEM267Q0VDI3 215 aaPredicted RBP11.61□□□□□ -0.55
HLA-F-223ENST00000465459 OXA1LQ15070 435 aa11.61□□□□□ -0.55
HLA-F-223ENST00000465459 TNXAQ16473 311 aa11.61□□□□□ -0.55
HLA-F-223ENST00000465459 ZNF429Q86V71 674 aa11.61□□□□□ -0.55
HLA-F-223ENST00000465459 OR5B3Q8NH48 314 aa11.61□□□□□ -0.55
HLA-F-223ENST00000465459 OR4A16Q8NH70 328 aa11.61□□□□□ -0.55
HLA-F-223ENST00000465459 SGMS2Q8NHU3 365 aa11.61□□□□□ -0.55
HLA-F-223ENST00000465459 CHPT1Q8WUD6 406 aa11.61□□□□□ -0.55
HLA-F-223ENST00000465459 ARPC1AQ92747 370 aa11.61□□□□□ -0.55
HLA-F-223ENST00000465459 TMEM68Q96MH6 324 aa11.61□□□□□ -0.55
HLA-F-223ENST00000465459 SPIN2AQ99865 258 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms