RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 A0A0G2JRQ6 117 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 KRBOX1C9JBD0 128 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 FAM90A26D6RGX4 464 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 LY6LH3BQJ8 138 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 NPFFO15130 113 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 PROP1O75360 226 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 IGKV1-5P01602 117 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 EWSR1Q01844 656 aaKnown RBP eCLIP13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 BAXQ07812 192 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 RUSC1-AS1Q66K80 236 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 BRD3OSQ6XYD6 125 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 RNASE11Q8TAA1 199 aaKnown RBP13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 ST6GALNAC6Q969X2 333 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 C5orf30Q96GV9 206 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 AJUBAQ96IF1 538 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 RAB40CQ96S21 281 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 GAB2Q9UQC2 676 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 MMP24Q9Y5R2 645 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 WRBO00258 174 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 RAB29O14966 203 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 SSSCA1O60232 199 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 ZP3P21754 424 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 HTR1DP28221 377 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 SAA4P35542 130 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 ZNF137PP52743 207 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 AKR1C2P52895 323 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 LGALS4P56470 323 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 DIAPH2-AS1Q14236 149 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 MIDNQ504T8 468 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 CD300LFQ8TDQ1 290 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 C17orf50Q8WW18 174 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 ZNF251Q9BRH9 671 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 GINS3Q9BRX5 216 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 DPM3Q9P2X0 92 aa13.68□□□□□ -0.22
EXOSC3-203ENST00000465229 NSD1Q96L73 2696 aaPredicted RBP13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 SAA2-SAA4A0A096LPE2 208 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 RAB19A4D1S5 217 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 SEC11BP0C7V7 166 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 P0C879 139 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 SAA2P0DJI9 122 aaPredicted RBP13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 LPAR6P43657 344 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 GPR12P47775 334 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 SULT1A2P50226 295 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 RPL30P62888 115 aaKnown RBP13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 RPL39P5Q59GN2 51 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 MINOS1Q5TGZ0 78 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 CCDC28AQ8IWP9 274 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 TMEM252Q8N6L7 170 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 SMIM8Q96KF7 97 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 TMEM160Q9NX00 188 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 CACNG5Q9UF02 275 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 NUP50Q9UKX7 468 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 TBL2Q9Y4P3 447 aaKnown RBP13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 AMMECR1Q9Y4X0 333 aaPredicted RBP13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 SOX21Q9Y651 276 aaPredicted RBP13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 MINOS1-NBL1R4GNA1 71 aa13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 TEP1Q99973 2627 aaKnown RBP13.67□□□□□ -0.22
EXOSC3-203ENST00000465229 CHST1O43916 411 aa13.66□□□□□ -0.22
EXOSC3-203ENST00000465229 BPIFB3P59826 476 aa13.66□□□□□ -0.22
EXOSC3-203ENST00000465229 NHLH2Q02577 135 aa13.66□□□□□ -0.22
EXOSC3-203ENST00000465229 UQCC3Q6UW78 93 aa13.66□□□□□ -0.22
EXOSC3-203ENST00000465229 Q6ZRM9 215 aa13.66□□□□□ -0.22
EXOSC3-203ENST00000465229 IL17RELQ6ZVW7 336 aa13.66□□□□□ -0.22
EXOSC3-203ENST00000465229 MARC2Q969Z3 335 aa13.66□□□□□ -0.22
EXOSC3-203ENST00000465229 BSCL2Q96G97 398 aaPredicted RBP13.66□□□□□ -0.22
EXOSC3-203ENST00000465229 WFDC1Q9HC57 220 aa13.66□□□□□ -0.22
EXOSC3-203ENST00000465229 WSB1Q9Y6I7 421 aa13.66□□□□□ -0.22
EXOSC3-203ENST00000465229 IGSF23A1L1A6 192 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 FAM24AA6NFZ4 105 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 EPHA1P21709 976 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 IL3RAP26951 378 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 CAV2P51636 162 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 PAX9P55771 341 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 TAS2R30P59541 319 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 RPL23AP62750 156 aaKnown RBP13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 ZNF266Q14584 549 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 TPTE2P1Q5T6R2 138 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 ZNF833PQ6ZTB9 187 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 Q71RC1 249 aaPredicted RBP13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 DYNAPQ8N1N2 210 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 TEX29Q8N6K0 151 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 MALSU1Q96EH3 234 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 SMIM3Q9BZL3 60 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 MAGT1Q9H0U3 335 aa13.65□□□□□ -0.22
EXOSC3-203ENST00000465229 TMEM50AO95807 157 aa13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 PAX6P26367 422 aa13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 CEACAM3P40198 252 aa13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 BLOC1S1P78537 153 aa13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 SSX2Q16385 188 aa13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 SPAG16Q8N0X2 631 aa13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 TCTEX1D2Q8WW35 142 aa13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 S1PR3Q99500 378 aa13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 HILPDAQ9Y5L2 63 aa13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 A0A0U1RQK1 487 aa13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 ZNF705EA8MWA4 302 aaPredicted RBP13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 RBFOX2O43251 390 aaKnown RBP eCLIP13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 SYNGR2O43760 224 aa13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 SPP1P10451 314 aa13.64□□□□□ -0.23
EXOSC3-203ENST00000465229 REG1BP48304 166 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms