RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 QTRT1Q9BXR0 403 aaKnown RBP11.88□□□□□ -0.51
COL5A1-205ENST00000464187 CSMD2Q7Z408 3487 aa11.87□□□□□ -0.51
COL5A1-205ENST00000464187 RBFOX2O43251 390 aaKnown RBP eCLIP11.87□□□□□ -0.51
COL5A1-205ENST00000464187 RBMXL2O75526 392 aaKnown RBP11.87□□□□□ -0.51
COL5A1-205ENST00000464187 SCAF4O95104 1147 aaKnown RBP11.87□□□□□ -0.51
COL5A1-205ENST00000464187 SRP19P09132 144 aaKnown RBP11.87□□□□□ -0.51
COL5A1-205ENST00000464187 OR2B8PP59922 312 aa11.87□□□□□ -0.51
COL5A1-205ENST00000464187 SSX7Q7RTT5 188 aa11.87□□□□□ -0.51
COL5A1-205ENST00000464187 RBMXL1Q96E39 390 aaKnown RBP11.87□□□□□ -0.51
COL5A1-205ENST00000464187 CIB3Q96Q77 187 aaPredicted RBP11.87□□□□□ -0.51
COL5A1-205ENST00000464187 RAB9BQ9NP90 201 aa11.87□□□□□ -0.51
COL5A1-205ENST00000464187 RPS10P5Q9NQ39 176 aa11.87□□□□□ -0.51
COL5A1-205ENST00000464187 SMCO4Q9NRQ5 59 aa11.87□□□□□ -0.51
COL5A1-205ENST00000464187 MIOXQ9UGB7 285 aa11.87□□□□□ -0.51
COL5A1-205ENST00000464187 A0A1W2PPE3 182 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 ZNF729A6NN14 1252 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-205ENST00000464187 FAM90A9PA6NNJ1 464 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 CEBPZOSA8MTT3 80 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 H7C2Y5 167 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 SNRNP70P08621 437 aaKnown RBP11.86□□□□□ -0.51
COL5A1-205ENST00000464187 RAB7AP51149 207 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 RAB2AP61019 212 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 SERF2P84101 59 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 AARDQ4LEZ3 155 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 CT45A1Q5HYN5 189 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 TMEM200BQ69YZ2 307 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 SSX9Q7RTT3 188 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 OR8B3Q8NGG8 313 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 CT45A3Q8NHU0 189 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 RXFP4Q8TDU9 374 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 DDB2Q92466 427 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 NRGNQ92686 78 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 OR8B2Q96RD0 313 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 C20orf24Q9BUV8 137 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 TMEM147Q9BVK8 224 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 GAB2Q9UQC2 676 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 TIMM9Q9Y5J7 89 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 SPG11Q96JI7 2443 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 C7orf77A4D0Y5 90 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 M0R036 132 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 KIR2DS2P43631 304 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 RPS16P62249 146 aaKnown RBP11.86□□□□□ -0.51
COL5A1-205ENST00000464187 ATP6V1FQ16864 119 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 TMEM41BQ5BJD5 291 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 SOHLH1Q5JUK2 328 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 PRAMEF5Q5TYX0 476 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 FAM122CQ6P4D5 195 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 ZNF439Q8NDP4 499 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 MBD3L1Q8WWY6 194 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 NEIL1Q96FI4 390 aaPredicted RBP11.86□□□□□ -0.51
COL5A1-205ENST00000464187 RCC1LQ96I51 464 aaKnown RBP11.86□□□□□ -0.51
COL5A1-205ENST00000464187 ZNF714Q96N38 554 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 CLCC1Q96S66 551 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 LINC00574Q9H8X3 128 aa11.86□□□□□ -0.51
COL5A1-205ENST00000464187 FBN2P35556 2912 aa11.85□□□□□ -0.51
COL5A1-205ENST00000464187 SAA2-SAA4A0A096LPE2 208 aa11.85□□□□□ -0.51
COL5A1-205ENST00000464187 LOC102723971A0A1B0GUV8 181 aa11.85□□□□□ -0.51
COL5A1-205ENST00000464187 COLCA2A8K830 154 aa11.85□□□□□ -0.51
COL5A1-205ENST00000464187 SAA2P0DJI9 122 aaPredicted RBP11.85□□□□□ -0.51
COL5A1-205ENST00000464187 CCL3L1P16619 93 aa11.85□□□□□ -0.51
COL5A1-205ENST00000464187 ELLP55199 621 aaPredicted RBP11.85□□□□□ -0.51
COL5A1-205ENST00000464187 FLI1Q01543 452 aaPredicted RBP11.85□□□□□ -0.51
COL5A1-205ENST00000464187 CENPVQ7Z7K6 275 aaPredicted RBP11.85□□□□□ -0.51
COL5A1-205ENST00000464187 VKORC1L1Q8N0U8 176 aa11.85□□□□□ -0.51
COL5A1-205ENST00000464187 GAL3ST2Q9H3Q3 398 aa11.85□□□□□ -0.51
COL5A1-205ENST00000464187 PATZ1Q9HBE1 687 aaKnown RBP11.85□□□□□ -0.51
COL5A1-205ENST00000464187 IDI2-AS1Q9NZ38 188 aa11.85□□□□□ -0.51
COL5A1-205ENST00000464187 PRELID3BQ9Y3B1 194 aa11.85□□□□□ -0.51
COL5A1-205ENST00000464187 HELZ2Q9BYK8 2649 aaKnown RBP11.84□□□□□ -0.51
COL5A1-205ENST00000464187 C15orf62A8K5M9 175 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 HSPB1P04792 205 aaKnown RBP11.84□□□□□ -0.51
COL5A1-205ENST00000464187 CTRB1P17538 263 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 PAX6P26367 422 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 ERVFRD-1P60508 538 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 WDR25Q64LD2 544 aaPredicted RBP11.84□□□□□ -0.51
COL5A1-205ENST00000464187 ZNF787Q6DD87 383 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 CTRB2Q6GPI1 263 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 LCN15Q6UWW0 184 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.84□□□□□ -0.51
COL5A1-205ENST00000464187 OR10P1Q8NGE3 313 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 PINX1Q96BK5 328 aaKnown RBP11.84□□□□□ -0.51
COL5A1-205ENST00000464187 PSMG3-AS1Q96PY0 264 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 S1PR3Q99500 378 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 ZNF251Q9BRH9 671 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 BPESC1Q9GZL8 116 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 ASH1LQ9NR48 2969 aaKnown RBP11.84□□□□□ -0.51
COL5A1-205ENST00000464187 CELSR2Q9HCU4 2923 aa11.84□□□□□ -0.51
COL5A1-205ENST00000464187 TRBV23-1A0A0A0MS06 115 aa11.83□□□□□ -0.51
COL5A1-205ENST00000464187 MMP23AO75900 390 aa11.83□□□□□ -0.51
COL5A1-205ENST00000464187 FBP1P09467 338 aa11.83□□□□□ -0.51
COL5A1-205ENST00000464187 NQO2P16083 231 aa11.83□□□□□ -0.51
COL5A1-205ENST00000464187 FGF7P21781 194 aa11.83□□□□□ -0.51
COL5A1-205ENST00000464187 FGF8P55075 233 aaPredicted RBP11.83□□□□□ -0.51
COL5A1-205ENST00000464187 ATP5J2P56134 94 aa11.83□□□□□ -0.51
COL5A1-205ENST00000464187 ERVK-16P61578 105 aa11.83□□□□□ -0.51
COL5A1-205ENST00000464187 RHEBQ15382 184 aa11.83□□□□□ -0.51
COL5A1-205ENST00000464187 VWC2Q2TAL6 325 aa11.83□□□□□ -0.51
COL5A1-205ENST00000464187 KHDC3LQ587J8 217 aa11.83□□□□□ -0.51
COL5A1-205ENST00000464187 ACSM6Q6P461 480 aa11.83□□□□□ -0.51
COL5A1-205ENST00000464187 CYB561D1Q8N8Q1 229 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms