RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 OR2A7Q96R45 310 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 GNB4Q9HAV0 340 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 PLEKHA2Q9HB19 425 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 NDUFA13Q9P0J0 144 aa13.75□□□□□ -0.21
VPS52-214ENST00000463486 MSGN1A6NI15 193 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 I3L521 148 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 S1PR2O95136 353 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 BRI3O95415 125 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 HRASP01112 189 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 IFNA6P05013 189 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 PF4V1P10720 104 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 ETV6P41212 452 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 C10orf55Q5SWW7 151 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 FAAP20Q6NZ36 180 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 MRPL41Q8IXM3 137 aaKnown RBP13.74□□□□□ -0.21
VPS52-214ENST00000463486 MMD2Q8IY49 270 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 LINC00482Q8N8I6 264 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 OR5M8Q8NGP6 311 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 OR6Q1Q8NGQ2 317 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 CD300LFQ8TDQ1 290 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 SRSF12Q8WXF0 261 aaKnown RBP13.74□□□□□ -0.21
VPS52-214ENST00000463486 BET1LQ9NYM9 111 aa13.74□□□□□ -0.21
VPS52-214ENST00000463486 TRAV3A0A0B4J244 114 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 RND3P61587 244 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 RUNX1Q01196 453 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 TNXAQ16473 311 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 SAMD5Q5TGI4 173 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 SSX9Q7RTT3 188 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 TBC1D26Q86UD7 250 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 OR5T1Q8NG75 326 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 OR4C16Q8NGL9 310 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 VSTM2AQ8TAG5 236 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 C4orf3Q8WVX3 66 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 TRIM63Q969Q1 353 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 TMEM68Q96MH6 324 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 DUX3Q96PT4 197 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 THAP7Q9BT49 309 aaPredicted RBP13.73□□□□□ -0.21
VPS52-214ENST00000463486 SLC2A9Q9NRM0 540 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 COMMD9Q9P000 198 aa13.73□□□□□ -0.21
VPS52-214ENST00000463486 CGB1A6NKQ9 187 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 TEX22C9J3V5 150 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 RBMXL2O75526 392 aaKnown RBP13.72□□□□□ -0.21
VPS52-214ENST00000463486 IGKV1-39P01597 117 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 IGKV1D-39P04432 117 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 MYOD1P15172 320 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 NQO2P16083 231 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 PI3P19957 117 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 MYCNOSP40205 109 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 LPAR6P43657 344 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 FHL3Q13643 280 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 MEF2DQ14814 521 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 DEFB136Q30KP8 78 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 TMEM65Q6PI78 240 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 CADM3Q8N126 398 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 ZNF486Q96H40 463 aaPredicted RBP13.72□□□□□ -0.21
VPS52-214ENST00000463486 FAM212BQ9NTI7 297 aaPredicted RBP13.72□□□□□ -0.21
VPS52-214ENST00000463486 VSIG4Q9Y279 399 aa13.72□□□□□ -0.21
VPS52-214ENST00000463486 NUDT19A8MXV4 375 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 G3V4G9 280 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 CCL24O00175 119 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 UPK2O00526 184 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 MPPED1O15442 326 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 AKAIN1P0CW23 69 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 APELAP0DMC3 54 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 PTBP1P26599 531 aaKnown RBP eCLIP13.71□□□□□ -0.21
VPS52-214ENST00000463486 MAS1LP35410 378 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 KPRPQ5T749 579 aaPredicted RBP13.71□□□□□ -0.21
VPS52-214ENST00000463486 POC5Q8NA72 575 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 ADAD2Q8NCV1 583 aaKnown RBP13.71□□□□□ -0.21
VPS52-214ENST00000463486 OR13C8Q8NGS7 320 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 OR4A5Q8NH83 315 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 MARCH1Q8TCQ1 289 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 MS4A10Q96PG2 267 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 AIFM2Q9BRQ8 373 aa13.71□□□□□ -0.21
VPS52-214ENST00000463486 H3BUA1 57 aa13.7□□□□□ -0.22
VPS52-214ENST00000463486 CREBL2O60519 120 aaPredicted RBP13.7□□□□□ -0.22
VPS52-214ENST00000463486 FGF2P09038 288 aa13.7□□□□□ -0.22
VPS52-214ENST00000463486 S100A5P33763 92 aa13.7□□□□□ -0.22
VPS52-214ENST00000463486 RPL8P62917 257 aaKnown RBP13.7□□□□□ -0.22
VPS52-214ENST00000463486 KLF9Q13886 244 aaPredicted RBP13.7□□□□□ -0.22
VPS52-214ENST00000463486 OXLD1Q5BKU9 147 aa13.7□□□□□ -0.22
VPS52-214ENST00000463486 TTC9CQ8N5M4 171 aa13.7□□□□□ -0.22
VPS52-214ENST00000463486 RTBDNQ9BSG5 229 aaPredicted RBP13.7□□□□□ -0.22
VPS52-214ENST00000463486 SLA2Q9H6Q3 261 aa13.7□□□□□ -0.22
VPS52-214ENST00000463486 TMEM140Q9NV12 185 aa13.7□□□□□ -0.22
VPS52-214ENST00000463486 SLC2A8Q9NY64 477 aa13.7□□□□□ -0.22
VPS52-214ENST00000463486 A6NHS1 94 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 HMX3A6NHT5 357 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 MARCH11A6NNE9 402 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 PF4P02776 101 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 RPA2P15927 270 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 HLA-GP17693 338 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 PPP5CP53041 499 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 PIGPP57054 158 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 OR2B8PP59922 312 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 BEAN1Q3B7T3 259 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 SCGB2B2Q4G0G5 96 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 PYDC2Q56P42 97 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 Q8N402 240 aa13.69□□□□□ -0.22
VPS52-214ENST00000463486 OR51S1Q8NGJ8 323 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms