RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 KLK9Q9UKQ9 250 aa15.46■□□□□ 0.07
CPSF7-209ENST00000463244 TP53TG1Q9Y2A0 90 aa15.46■□□□□ 0.07
CPSF7-209ENST00000463244 MRPS7Q9Y2R9 242 aaKnown RBP15.46■□□□□ 0.07
CPSF7-209ENST00000463244 PRELID3BQ9Y3B1 194 aa15.46■□□□□ 0.07
CPSF7-209ENST00000463244 S4R3C0 116 aa15.46■□□□□ 0.07
CPSF7-209ENST00000463244 A0A1B0GW64 132 aa15.45■□□□□ 0.06
CPSF7-209ENST00000463244 ERICH4A6NGS2 130 aa15.45■□□□□ 0.06
CPSF7-209ENST00000463244 KBTBD11O94819 623 aa15.45■□□□□ 0.06
CPSF7-209ENST00000463244 CRYGCP07315 174 aa15.45■□□□□ 0.06
CPSF7-209ENST00000463244 ZNF735P0CB33 412 aa15.45■□□□□ 0.06
CPSF7-209ENST00000463244 RPL27AP46776 148 aaKnown RBP15.45■□□□□ 0.06
CPSF7-209ENST00000463244 ARFRP1Q13795 201 aa15.45■□□□□ 0.06
CPSF7-209ENST00000463244 OR2B11Q5JQS5 317 aa15.45■□□□□ 0.06
CPSF7-209ENST00000463244 OGFRL1Q5TC84 451 aaPredicted RBP15.45■□□□□ 0.06
CPSF7-209ENST00000463244 LYG2Q86SG7 212 aa15.45■□□□□ 0.06
CPSF7-209ENST00000463244 VSTM2AQ8TAG5 236 aa15.45■□□□□ 0.06
CPSF7-209ENST00000463244 FYTTD1Q96QD9 318 aaKnown RBP15.45■□□□□ 0.06
CPSF7-209ENST00000463244 OR2A7Q96R45 310 aa15.45■□□□□ 0.06
CPSF7-209ENST00000463244 SCN3BQ9NY72 215 aa15.45■□□□□ 0.06
CPSF7-209ENST00000463244 TRAV25A0A0B4J276 109 aa15.44■□□□□ 0.06
CPSF7-209ENST00000463244 J3QRK9 145 aa15.44■□□□□ 0.06
CPSF7-209ENST00000463244 IGLV2-14P01704 120 aa15.44■□□□□ 0.06
CPSF7-209ENST00000463244 AREGP15514 252 aa15.44■□□□□ 0.06
CPSF7-209ENST00000463244 BMI1P35226 326 aa15.44■□□□□ 0.06
CPSF7-209ENST00000463244 TALDO1P37837 337 aa15.44■□□□□ 0.06
CPSF7-209ENST00000463244 FABP5Q01469 135 aa15.44■□□□□ 0.06
CPSF7-209ENST00000463244 RCN1Q15293 331 aa15.44■□□□□ 0.06
CPSF7-209ENST00000463244 Q6ZWC4 215 aa15.44■□□□□ 0.06
CPSF7-209ENST00000463244 PUSL1Q8N0Z8 303 aaKnown RBP15.44■□□□□ 0.06
CPSF7-209ENST00000463244 TMEM167AQ8TBQ9 72 aa15.44■□□□□ 0.06
CPSF7-209ENST00000463244 EEF1AKMT3Q96AZ1 226 aa15.44■□□□□ 0.06
CPSF7-209ENST00000463244 RBMX2Q9Y388 322 aaKnown RBP15.44■□□□□ 0.06
CPSF7-209ENST00000463244 OR2W1Q9Y3N9 320 aa15.44■□□□□ 0.06
CPSF7-209ENST00000463244 DHFRP00374 187 aa15.43■□□□□ 0.06
CPSF7-209ENST00000463244 HLA-DQB1P01920 261 aa15.43■□□□□ 0.06
CPSF7-209ENST00000463244 C8orf88P0DMB2 117 aa15.43■□□□□ 0.06
CPSF7-209ENST00000463244 CD36P16671 472 aa15.43■□□□□ 0.06
CPSF7-209ENST00000463244 CTRB1P17538 263 aa15.43■□□□□ 0.06
CPSF7-209ENST00000463244 PSMB6P28072 239 aa15.43■□□□□ 0.06
CPSF7-209ENST00000463244 MAS1LP35410 378 aa15.43■□□□□ 0.06
CPSF7-209ENST00000463244 MLLT11Q13015 90 aaPredicted RBP15.43■□□□□ 0.06
CPSF7-209ENST00000463244 CTRB2Q6GPI1 263 aa15.43■□□□□ 0.06
CPSF7-209ENST00000463244 RPP25LQ8N5L8 163 aaKnown RBP15.43■□□□□ 0.06
CPSF7-209ENST00000463244 OR1L6Q8NGR2 347 aa15.43■□□□□ 0.06
CPSF7-209ENST00000463244 SPRY2O43597 315 aa15.42■□□□□ 0.06
CPSF7-209ENST00000463244 SLC22A5O76082 557 aa15.42■□□□□ 0.06
CPSF7-209ENST00000463244 HIST1H1BP16401 226 aaKnown RBP15.42■□□□□ 0.06
CPSF7-209ENST00000463244 ATF4P18848 351 aaPredicted RBP15.42■□□□□ 0.06
CPSF7-209ENST00000463244 RAB6AP20340 208 aa15.42■□□□□ 0.06
CPSF7-209ENST00000463244 DTYMKP23919 212 aa15.42■□□□□ 0.06
CPSF7-209ENST00000463244 APOC4P55056 127 aa15.42■□□□□ 0.06
CPSF7-209ENST00000463244 DEFB135Q30KP9 77 aa15.42■□□□□ 0.06
CPSF7-209ENST00000463244 UNQ9165/PRO28630Q6UXU0 137 aa15.42■□□□□ 0.06
CPSF7-209ENST00000463244 RBPMS2Q6ZRY4 209 aaKnown RBP15.42■□□□□ 0.06
CPSF7-209ENST00000463244 OR4S2Q8NH73 311 aa15.42■□□□□ 0.06
CPSF7-209ENST00000463244 MARC2Q969Z3 335 aa15.42■□□□□ 0.06
CPSF7-209ENST00000463244 ELF5Q9UKW6 265 aaPredicted RBP15.42■□□□□ 0.06
CPSF7-209ENST00000463244 KLK5Q9Y337 293 aaPredicted RBP15.42■□□□□ 0.06
CPSF7-209ENST00000463244 IGLV11-55A0A075B6I3 123 aa15.41■□□□□ 0.06
CPSF7-209ENST00000463244 IGKV1D-13A0A0B4J2D9 117 aa15.41■□□□□ 0.06
CPSF7-209ENST00000463244 MFSD2BA6NFX1 497 aa15.41■□□□□ 0.06
CPSF7-209ENST00000463244 CASQ2O14958 399 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-209ENST00000463244 CLEC3BP05452 202 aa15.41■□□□□ 0.06
CPSF7-209ENST00000463244 IGKV1-13P0DP09 117 aa15.41■□□□□ 0.06
CPSF7-209ENST00000463244 NFYAP23511 347 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-209ENST00000463244 BRWD1-AS2P59051 145 aa15.41■□□□□ 0.06
CPSF7-209ENST00000463244 SSX1Q16384 188 aa15.41■□□□□ 0.06
CPSF7-209ENST00000463244 TRBV7-1A0A0A6YYK4 115 aa15.4■□□□□ 0.06
CPSF7-209ENST00000463244 METTL21EPA6NDL7 271 aa15.4■□□□□ 0.06
CPSF7-209ENST00000463244 CTXN2P0C2S0 81 aa15.4■□□□□ 0.06
CPSF7-209ENST00000463244 GALP22466 123 aa15.4■□□□□ 0.06
CPSF7-209ENST00000463244 OR10A3P58181 314 aa15.4■□□□□ 0.06
CPSF7-209ENST00000463244 EIF4EBP1Q13541 118 aaPredicted RBP15.4■□□□□ 0.06
CPSF7-209ENST00000463244 ZNF585BQ52M93 769 aa15.4■□□□□ 0.06
CPSF7-209ENST00000463244 OR2C3Q8N628 320 aa15.4■□□□□ 0.06
CPSF7-209ENST00000463244 CXorf58Q96LI9 332 aa15.4■□□□□ 0.06
CPSF7-209ENST00000463244 HSD17B10Q99714 261 aaKnown RBP15.4■□□□□ 0.06
CPSF7-209ENST00000463244 DUSP21Q9H596 190 aa15.4■□□□□ 0.06
CPSF7-209ENST00000463244 ACOT13Q9NPJ3 140 aa15.4■□□□□ 0.06
CPSF7-209ENST00000463244 MRPL27Q9P0M9 148 aaKnown RBP15.4■□□□□ 0.06
CPSF7-209ENST00000463244 IFITM5A6NNB3 132 aa15.39■□□□□ 0.05
CPSF7-209ENST00000463244 EBAG9O00559 213 aa15.39■□□□□ 0.05
CPSF7-209ENST00000463244 UBE2CO00762 179 aa15.39■□□□□ 0.05
CPSF7-209ENST00000463244 REG1AP05451 166 aa15.39■□□□□ 0.05
CPSF7-209ENST00000463244 DEFA4P12838 97 aa15.39■□□□□ 0.05
CPSF7-209ENST00000463244 ELLP55199 621 aaPredicted RBP15.39■□□□□ 0.05
CPSF7-209ENST00000463244 RPL8P62917 257 aaKnown RBP15.39■□□□□ 0.05
CPSF7-209ENST00000463244 SLC38A6Q8IZM9 456 aa15.39■□□□□ 0.05
CPSF7-209ENST00000463244 TCTEX1D2Q8WW35 142 aa15.39■□□□□ 0.05
CPSF7-209ENST00000463244 SPATA2Q9UM82 520 aa15.39■□□□□ 0.05
CPSF7-209ENST00000463244 TPRKBQ9Y3C4 175 aa15.39■□□□□ 0.05
CPSF7-209ENST00000463244 DNAH6Q9C0G6 4158 aa15.38■□□□□ 0.05
CPSF7-209ENST00000463244 TRAV1-2A0A0B4J238 106 aa15.38■□□□□ 0.05
CPSF7-209ENST00000463244 PDCD5O14737 125 aa15.38■□□□□ 0.05
CPSF7-209ENST00000463244 RGS10O43665 173 aa15.38■□□□□ 0.05
CPSF7-209ENST00000463244 MYOD1P15172 320 aa15.38■□□□□ 0.05
CPSF7-209ENST00000463244 CRHBPP24387 322 aa15.38■□□□□ 0.05
CPSF7-209ENST00000463244 GPR183P32249 361 aa15.38■□□□□ 0.05
CPSF7-209ENST00000463244 ARL6IP1Q15041 203 aa15.38■□□□□ 0.05
CPSF7-209ENST00000463244 SSX9Q7RTT3 188 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms