RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ELSPBP1Q96BH3 223 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 MRPS24Q96EL2 167 aaKnown RBP1.98□□□□□ -2.09
HPS3-203ENST00000460822 SPACA5Q96QH8 159 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 CAMK2N2Q96S95 79 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 TMEM208Q9BTX3 173 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 NUDT9Q9BW91 350 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 METTL9Q9H1A3 318 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 FBXL15Q9H469 300 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 C11orf49Q9H6J7 331 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 WFDC1Q9HC57 220 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 FAM206AQ9NX38 181 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 COPZ2Q9P299 210 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 RPS6KB2Q9UBS0 482 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 PSG11Q9UQ72 335 aa1.98□□□□□ -2.09
HPS3-203ENST00000460822 A0A0C4DFX4 3053 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 EML5Q05BV3 1969 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 TRBV6-6A0A0A6YYG2 114 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 DAPL1A0PJW8 107 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 PQLC2LA1A4F0 135 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 LINC00587B1AMM8 73 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 C21orf140B9A014 251 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 M0R036 132 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 EEF1E1O43324 174 aaKnown RBP1.97□□□□□ -2.09
HPS3-203ENST00000460822 SULT1B1O43704 296 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 ANGPTL7O43827 346 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 CNMDO75829 334 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 IFNA14P01570 189 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 APOC3P02656 99 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 MT-ND4P03905 459 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 IFNA6P05013 189 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 MRPL3P09001 348 aaKnown RBP1.97□□□□□ -2.09
HPS3-203ENST00000460822 TLX1NBP0CAT3 122 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 PRSS3P35030 304 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 IFNGR2P38484 337 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 GRB2P62993 217 aaKnown RBP1.97□□□□□ -2.09
HPS3-203ENST00000460822 REEP5Q00765 189 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 FAM53BQ14153 422 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 INSL4Q14641 139 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 FBXL19-AS1Q494R0 122 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 Q499Y3 187 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 HACD4Q5VWC8 232 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 CYB5R2Q6BCY4 276 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 ALKAL2Q6UX46 152 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 TOMM5Q8N4H5 51 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 PPTC7Q8NI37 304 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 COQ8AQ8NI60 647 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 PIGXQ8TBF5 258 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 ACOT12Q8WYK0 555 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 EXOSC8Q96B26 276 aaKnown RBP1.97□□□□□ -2.09
HPS3-203ENST00000460822 ZNF799Q96GE5 643 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 C18orf15Q96N68 181 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 OR2A5Q96R48 311 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 GGTLC1Q9BX51 225 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 SLC17A9Q9BYT1 436 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 NKX6-2Q9C056 277 aaPredicted RBP1.97□□□□□ -2.09
HPS3-203ENST00000460822 TVP23BQ9NYZ1 205 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 NUMA1Q14980 2115 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 HEATR5BQ9P2D3 2071 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 DOCK3Q8IZD9 2030 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 PLXNA2O75051 1894 aa1.97□□□□□ -2.09
HPS3-203ENST00000460822 SCN2AQ99250 2005 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 TRAV8-2A0A0B4J237 113 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 IGHV1OR15-9A0A0B4J2B8 117 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 A0A0D9SEW6 157 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 A0A1B0GVX0 72 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 IRGMA1A4Y4 181 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 A6NIN4 97 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 MCRIP1C9JLW8 97 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 D6RAR5 112 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 H3BP45 60 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 FAAHO00519 579 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 UPK2O00526 184 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 PDCD6O75340 191 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 SIX6O95475 246 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 IGHV1-8P0DP01 117 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 GABRA1P14867 456 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 ATF1P18846 271 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 NFYAP23511 347 aaPredicted RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 S100A11P31949 105 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 KIR3DL2P43630 455 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 RAB13P51153 203 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 CCL23P55773 120 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 HBA1P69905 142 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 CDK6Q00534 326 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 MPPED2Q15777 294 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 CLEC12BQ2HXU8 276 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 MPV17L2Q567V2 206 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 TSPO2Q5TGU0 170 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 SFXN4Q6P4A7 337 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 LRRN1Q6UXK5 716 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 FAM231DQ6ZW35 169 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 FAM19A5Q7Z5A7 132 aaPredicted RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 PRNTQ86SH4 94 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 PDZD9Q8IXQ8 264 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 SLC26A10Q8NG04 563 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 OR11G2Q8NGC1 345 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 OR5M1Q8NGP8 315 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 HAVCR2Q8TDQ0 301 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 GNPDA2Q8TDQ7 276 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 CASTOR1Q8WTX7 329 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms