RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 AMTNQ6UX39 209 aa2.3□□□□□ -2.04
CCDC58-202ENST00000460810 SDIM1Q6ZPB5 146 aa2.3□□□□□ -2.04
CCDC58-202ENST00000460810 TMEM136Q6ZRR5 245 aa2.3□□□□□ -2.04
CCDC58-202ENST00000460810 Q6ZS49 121 aa2.3□□□□□ -2.04
CCDC58-202ENST00000460810 TMPPEQ6ZT21 453 aa2.3□□□□□ -2.04
CCDC58-202ENST00000460810 LYZL2Q7Z4W2 148 aa2.3□□□□□ -2.04
CCDC58-202ENST00000460810 TBC1D19Q8N5T2 526 aa2.3□□□□□ -2.04
CCDC58-202ENST00000460810 OR11H1Q8NG94 326 aa2.3□□□□□ -2.04
CCDC58-202ENST00000460810 ROPN1LQ96C74 230 aa2.3□□□□□ -2.04
CCDC58-202ENST00000460810 GINS3Q9BRX5 216 aa2.3□□□□□ -2.04
CCDC58-202ENST00000460810 ABCC12Q96J65 1359 aa2.3□□□□□ -2.04
CCDC58-202ENST00000460810 COL18A1P39060 1754 aa2.3□□□□□ -2.04
CCDC58-202ENST00000460810 PCM1Q15154 2024 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 TRIP11Q15643 1979 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 TRAV40A0A0B4J280 105 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 A0A1B0GV72 72 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 LOC105371267A0A1B0GV96 52 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 ZNF682O95780 498 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 SERPINE1P05121 402 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 ZNF286BP0CG31 522 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 CBR1P16152 277 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 TNFRSF9Q07011 255 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 FAM229BQ4G0N7 80 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 C3orf33Q6P1S2 294 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 GOLT1AQ6ZVE7 132 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 OR11H6Q8NGC7 330 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 OR13C8Q8NGS7 320 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 FNDC9Q8TBE3 224 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 SCRT1Q9BWW7 348 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 WDR61Q9GZS3 305 aaKnown RBP2.29□□□□□ -2.04
CCDC58-202ENST00000460810 TMEM222Q9H0R3 208 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 C11orf68Q9H3H3 251 aaKnown RBP2.29□□□□□ -2.04
CCDC58-202ENST00000460810 FBXL12Q9NXK8 326 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 TMEM56-RWDD3S4R434 201 aa2.29□□□□□ -2.04
CCDC58-202ENST00000460810 SCN4AP35499 1836 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 SLIT3O75094 1523 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 SSH2Q76I76 1423 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 PTPRJQ12913 1337 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 TRBV20OR9-2A0A075B6H5 130 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 hCG_1818297A0A087WSY0 165 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 A0A087WUU8 490 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 IGKV1D-43A0A0B4J1Z2 117 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 TRAPPC13A5PLN9 417 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 A8MT66 165 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 OR11H12B2RN74 326 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 UBE2L6O14933 153 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 LY6HO94772 140 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 SOD1P00441 154 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 C1QBP02746 253 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 SULT1A3P0DMM9 295 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 SULT1A4P0DMN0 295 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 CPMP14384 443 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 SLC25A16P16260 332 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 CRHBPP24387 322 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 FOXA1P55317 472 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 KRTAP25-1Q3LHN0 102 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 GLT8D1Q68CQ7 371 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 WDR59Q6PJI9 974 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 IGFL3Q6UXB1 125 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 C12orf45Q8N5I9 185 aaPredicted RBP2.28□□□□□ -2.04
CCDC58-202ENST00000460810 Q8NAQ8 132 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 OR11H2Q8NH07 326 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 OR10A6Q8NH74 314 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 OR13C6PQ8NH95 151 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 MUC7Q8TAX7 377 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 MRPL30Q8TCC3 161 aaKnown RBP2.28□□□□□ -2.04
CCDC58-202ENST00000460810 GNPDA2Q8TDQ7 276 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 RASSF5Q8WWW0 418 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 STARD4Q96DR4 205 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 TTTY13Q9BZ97 58 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 COMMD5Q9GZQ3 224 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 TP73-AS1Q9UF72 201 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 PYCARDQ9ULZ3 195 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 CYSLTR1Q9Y271 337 aa2.28□□□□□ -2.04
CCDC58-202ENST00000460810 SYNMO15061 1565 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 DENND4BO75064 1496 aaPredicted RBP2.27□□□□□ -2.05
CCDC58-202ENST00000460810 NUP205Q92621 2012 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 IGLV4-60A0A075B6I1 120 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 TMEM150BA6NC51 233 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 I3L521 148 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 PIRO00625 290 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 HMGB3O15347 200 aaKnown RBP2.27□□□□□ -2.05
CCDC58-202ENST00000460810 MFSD11O43934 449 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 SRP19P09132 144 aaKnown RBP2.27□□□□□ -2.05
CCDC58-202ENST00000460810 ZNF705DP0CH99 300 aaPredicted RBP2.27□□□□□ -2.05
CCDC58-202ENST00000460810 SERPINB1P30740 379 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 GABRA2P47869 451 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 RAB13P51153 203 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 RPL30P62888 115 aaKnown RBP2.27□□□□□ -2.05
CCDC58-202ENST00000460810 LGALSLQ3ZCW2 172 aaPredicted RBP2.27□□□□□ -2.05
CCDC58-202ENST00000460810 SMARCD3Q6STE5 483 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 SPINT4Q6UDR6 99 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 SSX8Q7RTT4 187 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 LYPD6Q86Y78 171 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 IGF2BP2-AS1Q96M15 143 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 KLF6Q99612 283 aaPredicted RBP2.27□□□□□ -2.05
CCDC58-202ENST00000460810 MGLLQ99685 303 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 MED29Q9NX70 200 aa2.27□□□□□ -2.05
CCDC58-202ENST00000460810 MIA2Q96PC5 1412 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms