RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 ACY3Q96HD9 319 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 OR52E6Q96RD3 313 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 VPS25Q9BRG1 176 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 EFCAB11Q9BUY7 163 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 CCDC32Q9BV29 185 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 GGACTQ9BVM4 153 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 EBPLQ9BY08 206 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 FAM96AQ9H5X1 160 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 SPANXA1Q9NS26 97 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 UQCC1Q9NVA1 299 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 ASF1BQ9NVP2 202 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 MED29Q9NX70 200 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 COA4Q9NYJ1 87 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 GLS2Q9UI32 602 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 POMPQ9Y244 141 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 DHX57Q6P158 1386 aaKnown RBP2.78□□□□□ -1.96
CCDC50-203ENST00000460064 RTL9Q8NET4 1388 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 A0A0B4J2C4 111 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 A0A1W2PNN7 141 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 hADV38S2A0JD32 116 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 C9orf170A2RU37 121 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 A8MWP4 228 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 C5orf58C9J3I9 102 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 D6RAR5 112 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 INMT-MINDY4F8WBC2 141 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 CYB5BO43169 146 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 IFNGP01579 166 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 IGHMP01871 453 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 OR4A8P0C604 315 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 HRES1P13985 223 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 CD200P41217 278 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 RAB13P51153 203 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 GNG5P63218 68 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 JOSD1Q15040 202 aaPredicted RBP2.78□□□□□ -1.96
CCDC50-203ENST00000460064 C1orf194Q5T5A4 169 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 C9orf64Q5T6V5 341 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 GOLT1AQ6ZVE7 132 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 OR11H6Q8NGC7 330 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 OR4D11Q8NGI4 311 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 OR4K15Q8NH41 348 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 GPER1Q99527 375 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 ULBP3Q9BZM4 244 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 ZNF586Q9NXT0 402 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 HDGFL3Q9Y3E1 203 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 R4GN34 69 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 PRDM2Q13029 1718 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 SHANK1Q9Y566 2161 aa2.78□□□□□ -1.96
CCDC50-203ENST00000460064 GRIN2BQ13224 1484 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 ATRNO75882 1429 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 CD109Q6YHK3 1445 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 KIF15Q9NS87 1388 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 IGKV3D-11A0A0A0MRZ8 115 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 TRAPPC13A5PLN9 417 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 CCDC160A6NGH7 325 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 TCF21O43680 179 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 FGF6P10767 208 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 CCL1P22362 96 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 CDK2P24941 298 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 PHBP35232 272 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 SERPINB10P48595 397 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 RPS24P62847 133 aaKnown RBP2.77□□□□□ -1.97
CCDC50-203ENST00000460064 PYDC2Q56P42 97 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 CENPWQ5EE01 88 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 AKR1C8PQ5T2L2 129 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 AMMECR1LQ6DCA0 310 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 CLEC20AQ6ZU45 233 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 OOSP2Q86WS3 158 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 LRRC28Q86X40 367 aaPredicted RBP2.77□□□□□ -1.97
CCDC50-203ENST00000460064 ZNF664Q8N3J9 261 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 FAM24BQ8N5W8 94 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 DEFB125Q8N687 156 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 GNPDA2Q8TDQ7 276 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 MAL2Q969L2 176 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 GALMQ96C23 342 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 REEP6Q96HR9 211 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 CCDC115Q96NT0 180 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 TMEM222Q9H0R3 208 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 SH3BGRL3Q9H299 93 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 OR51I2Q9H344 312 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 COPZ2Q9P299 210 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
CCDC50-203ENST00000460064 YTHDC2Q9H6S0 1430 aaKnown RBP2.76□□□□□ -1.97
CCDC50-203ENST00000460064 MYH3P11055 1940 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 TRAPPC2LH3BP13 241 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 TXNDC9O14530 226 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 DEGS1O15121 323 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 PIAS1O75925 651 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 IGF2P01344 180 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 RBP1P09455 135 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 CTBP2P56545 445 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 DEFA1P59665 94 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 DAD1P61803 113 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 HLA-DRB3P79483 266 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 BRD3OSQ6XYD6 125 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 Q6ZQT7 251 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 Q6ZRU5 148 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 VN1R4Q7Z5H5 301 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 SLC25A45Q8N413 288 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 C3orf22Q8N5N4 141 aa2.76□□□□□ -1.97
CCDC50-203ENST00000460064 ZIC4Q8N9L1 334 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms