RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, humanhuman

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-205ENST00000458729 ELANEP08246 267 aa20.27■□□□□ 0.84
SEMA3C-205ENST00000458729 EGR2P11161 476 aaPredicted RBP20.27■□□□□ 0.84
SEMA3C-205ENST00000458729 C2orf68Q2NKX9 166 aa20.27■□□□□ 0.84
SEMA3C-205ENST00000458729 ZNF585BQ52M93 769 aa20.27■□□□□ 0.84
SEMA3C-205ENST00000458729 AKIRIN2Q53H80 203 aa20.27■□□□□ 0.84
SEMA3C-205ENST00000458729 SSX9Q7RTT3 188 aa20.27■□□□□ 0.84
SEMA3C-205ENST00000458729 S100ZQ8WXG8 99 aa20.27■□□□□ 0.84
SEMA3C-205ENST00000458729 ZNF430Q9H8G1 570 aaPredicted RBP20.27■□□□□ 0.84
SEMA3C-205ENST00000458729 AKIP1Q9NQ31 210 aa20.27■□□□□ 0.84
SEMA3C-205ENST00000458729 BET1LQ9NYM9 111 aa20.27■□□□□ 0.84
SEMA3C-205ENST00000458729 TSSC4Q9Y5U2 329 aaPredicted RBP20.27■□□□□ 0.84
SEMA3C-205ENST00000458729 TET2Q6N021 2002 aaPredicted RBP20.27■□□□□ 0.84
SEMA3C-205ENST00000458729 PPIFP30405 207 aaKnown RBP20.27■□□□□ 0.83
SEMA3C-205ENST00000458729 ERVK-16P61578 105 aa20.27■□□□□ 0.83
SEMA3C-205ENST00000458729 SSBP2P81877 361 aaPredicted RBP20.27■□□□□ 0.83
SEMA3C-205ENST00000458729 FOXE3Q13461 319 aa20.27■□□□□ 0.83
SEMA3C-205ENST00000458729 TNXAQ16473 311 aa20.27■□□□□ 0.83
SEMA3C-205ENST00000458729 ECSCRQ19T08 205 aa20.27■□□□□ 0.83
SEMA3C-205ENST00000458729 MINDY2Q8NBR6 621 aa20.27■□□□□ 0.83
SEMA3C-205ENST00000458729 GRPEL2Q8TAA5 225 aa20.27■□□□□ 0.83
SEMA3C-205ENST00000458729 R3HDM4Q96D70 268 aa20.27■□□□□ 0.83
SEMA3C-205ENST00000458729 TMEM68Q96MH6 324 aa20.27■□□□□ 0.83
SEMA3C-205ENST00000458729 B3GALNT1O75752 331 aa20.26■□□□□ 0.83
SEMA3C-205ENST00000458729 MAS1LP35410 378 aa20.26■□□□□ 0.83
SEMA3C-205ENST00000458729 CXorf66Q5JRM2 361 aaPredicted RBP20.26■□□□□ 0.83
SEMA3C-205ENST00000458729 OR4A47Q6IF82 309 aa20.26■□□□□ 0.83
SEMA3C-205ENST00000458729 UNQ5815/PRO19632Q6UWF5 114 aa20.26■□□□□ 0.83
SEMA3C-205ENST00000458729 DMBX1Q8NFW5 382 aa20.26■□□□□ 0.83
SEMA3C-205ENST00000458729 RTBDNQ9BSG5 229 aaPredicted RBP20.26■□□□□ 0.83
SEMA3C-205ENST00000458729 FAM103A1Q9BTL3 118 aaKnown RBP20.26■□□□□ 0.83
SEMA3C-205ENST00000458729 ZFP57Q9NU63 452 aa20.26■□□□□ 0.83
SEMA3C-205ENST00000458729 H0Y980 276 aa20.25■□□□□ 0.83
SEMA3C-205ENST00000458729 SERPINE2P07093 398 aa20.25■□□□□ 0.83
SEMA3C-205ENST00000458729 C19orf54Q5BKX5 351 aa20.25■□□□□ 0.83
SEMA3C-205ENST00000458729 HIST2H2BDQ6DRA6 164 aa20.25■□□□□ 0.83
SEMA3C-205ENST00000458729 CADM3Q8N126 398 aa20.25■□□□□ 0.83
SEMA3C-205ENST00000458729 LFNGQ8NES3 379 aa20.25■□□□□ 0.83
SEMA3C-205ENST00000458729 C5orf66Q9H5L9 145 aa20.25■□□□□ 0.83
SEMA3C-205ENST00000458729 C3orf85A0A1B0GTC6 90 aa20.24■□□□□ 0.83
SEMA3C-205ENST00000458729 NAP1L6A6NFF2 107 aa20.24■□□□□ 0.83
SEMA3C-205ENST00000458729 MARCH11A6NNE9 402 aa20.24■□□□□ 0.83
SEMA3C-205ENST00000458729 IL7P13232 177 aa20.24■□□□□ 0.83
SEMA3C-205ENST00000458729 RPA2P15927 270 aa20.24■□□□□ 0.83
SEMA3C-205ENST00000458729 NSUN5P1Q3KNT7 163 aa20.24■□□□□ 0.83
SEMA3C-205ENST00000458729 RNF152Q8N8N0 203 aa20.24■□□□□ 0.83
SEMA3C-205ENST00000458729 TMEM140Q9NV12 185 aa20.24■□□□□ 0.83
SEMA3C-205ENST00000458729 FOXA2Q9Y261 457 aaPredicted RBP20.24■□□□□ 0.83
SEMA3C-205ENST00000458729 IGLV1-40P01703 118 aa20.23■□□□□ 0.83
SEMA3C-205ENST00000458729 IL6RP08887 468 aaPredicted RBP20.23■□□□□ 0.83
SEMA3C-205ENST00000458729 RPL8P62917 257 aaKnown RBP20.23■□□□□ 0.83
SEMA3C-205ENST00000458729 KHDC1LQ5JSQ8 128 aa20.23■□□□□ 0.83
SEMA3C-205ENST00000458729 PRR31Q5SQ13 230 aa20.23■□□□□ 0.83
SEMA3C-205ENST00000458729 OR5M8Q8NGP6 311 aa20.23■□□□□ 0.83
SEMA3C-205ENST00000458729 SRSF12Q8WXF0 261 aaKnown RBP20.23■□□□□ 0.83
SEMA3C-205ENST00000458729 TNCP24821 2201 aa20.23■□□□□ 0.83
SEMA3C-205ENST00000458729 TEX13DA0A0J9YY54 714 aaPredicted RBP20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 A0A1W2PN81 502 aa20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 ADARB2-AS1A8MUL3 147 aa20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 UPK2O00526 184 aa20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 KRASP01116 189 aa20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 FGF2P09038 288 aa20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 PSMB8P28062 276 aa20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 CHRNA7P36544 502 aa20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 TMEM65Q6PI78 240 aa20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 PHB2Q99623 299 aa20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 SLC25A21Q9BQT8 299 aaPredicted RBP20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 C7orf50Q9BRJ6 194 aaKnown RBP20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 CCDC32Q9BV29 185 aa20.22■□□□□ 0.83
SEMA3C-205ENST00000458729 MSGN1A6NI15 193 aa20.21■□□□□ 0.83
SEMA3C-205ENST00000458729 CENPXA8MT69 81 aa20.21■□□□□ 0.83
SEMA3C-205ENST00000458729 CD40LGP29965 261 aa20.21■□□□□ 0.83
SEMA3C-205ENST00000458729 G6PCP35575 357 aa20.21■□□□□ 0.83
SEMA3C-205ENST00000458729 RPL23AP62750 156 aaKnown RBP20.21■□□□□ 0.83
SEMA3C-205ENST00000458729 TP53RKQ96S44 253 aa20.21■□□□□ 0.83
SEMA3C-205ENST00000458729 SPIN2AQ99865 258 aa20.21■□□□□ 0.83
SEMA3C-205ENST00000458729 SPIN2BQ9BPZ2 258 aa20.21■□□□□ 0.83
SEMA3C-205ENST00000458729 NAA60Q9H7X0 242 aa20.21■□□□□ 0.83
SEMA3C-205ENST00000458729 VSIG4Q9Y279 399 aa20.21■□□□□ 0.83
SEMA3C-205ENST00000458729 A0A1W2PRX2 142 aa20.2■□□□□ 0.82
SEMA3C-205ENST00000458729 RPLP1P05386 114 aaKnown RBP20.2■□□□□ 0.82
SEMA3C-205ENST00000458729 HLA-GP17693 338 aa20.2■□□□□ 0.82
SEMA3C-205ENST00000458729 CRYM-AS1A6NIL9 109 aa20.19■□□□□ 0.82
SEMA3C-205ENST00000458729 ATG12O94817 140 aa20.19■□□□□ 0.82
SEMA3C-205ENST00000458729 PF4V1P10720 104 aa20.19■□□□□ 0.82
SEMA3C-205ENST00000458729 RPL27AP46776 148 aaKnown RBP20.19■□□□□ 0.82
SEMA3C-205ENST00000458729 OR4F17Q8NGA8 305 aa20.19■□□□□ 0.82
SEMA3C-205ENST00000458729 SEC22AQ96IW7 307 aa20.19■□□□□ 0.82
SEMA3C-205ENST00000458729 OR4F4Q96R69 305 aa20.19■□□□□ 0.82
SEMA3C-205ENST00000458729 TSC22D3Q99576 134 aa20.19■□□□□ 0.82
SEMA3C-205ENST00000458729 WDR12Q9GZL7 423 aaKnown RBP20.19■□□□□ 0.82
SEMA3C-205ENST00000458729 KCNIP3Q9Y2W7 256 aa20.19■□□□□ 0.82
SEMA3C-205ENST00000458729 SOX15O60248 233 aa20.18■□□□□ 0.82
SEMA3C-205ENST00000458729 IGKV1-39P01597 117 aa20.18■□□□□ 0.82
SEMA3C-205ENST00000458729 IGKV1D-39P04432 117 aa20.18■□□□□ 0.82
SEMA3C-205ENST00000458729 UCP1P25874 307 aa20.18■□□□□ 0.82
SEMA3C-205ENST00000458729 SLC6A1P30531 599 aa20.18■□□□□ 0.82
SEMA3C-205ENST00000458729 RAB9AP51151 201 aa20.18■□□□□ 0.82
SEMA3C-205ENST00000458729 DHODHQ02127 395 aa20.18■□□□□ 0.82
SEMA3C-205ENST00000458729 TRIM16LQ309B1 348 aa20.18■□□□□ 0.82
SEMA3C-205ENST00000458729 SP6Q3SY56 376 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms