RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 DPTQ07507 201 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 CATR1Q13166 79 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 FOXE3Q13461 319 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 HES1Q14469 280 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 SLC25A53Q5H9E4 307 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 STPG1Q5TH74 334 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 C1orf140Q5VVS0 124 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 SPATA31B1PQ5VZV4 182 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 Q6AWC8 147 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 Q6ZS49 121 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 C1QL2Q7Z5L3 287 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 SPATA12Q7Z6I5 190 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 WDR5BQ86VZ2 330 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 ZNF695Q8IW36 515 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 GVQW1Q8N7I0 195 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 LINC00482Q8N8I6 264 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 OR51H1Q8NH63 302 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 TMEM190Q8WZ59 177 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 DAZLQ92904 295 aaKnown RBP4.69□□□□□ -1.66
HMGB4-202ENST00000458277 TNFRSF13CQ96RJ3 184 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 NMNAT3Q96T66 252 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 PAAF1Q9BRP4 392 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 CHRNA10Q9GZZ6 450 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 LINC00597Q9H2U6 94 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 ENY2Q9NPA8 101 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 ZNF331Q9NQX6 463 aaPredicted RBP4.69□□□□□ -1.66
HMGB4-202ENST00000458277 WSB2Q9NYS7 404 aaPredicted RBP4.69□□□□□ -1.66
HMGB4-202ENST00000458277 THAP10Q9P2Z0 257 aaPredicted RBP4.69□□□□□ -1.66
HMGB4-202ENST00000458277 B4GALT7Q9UBV7 327 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 MRPS17Q9Y2R5 130 aaKnown RBP4.69□□□□□ -1.66
HMGB4-202ENST00000458277 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.69□□□□□ -1.66
HMGB4-202ENST00000458277 LINC00312Q9Y6C7 94 aa4.69□□□□□ -1.66
HMGB4-202ENST00000458277 CKAP5Q14008 2032 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 C5orf49A4QMS7 147 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 FAM24AA6NFZ4 105 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 C11orf94C9JXX5 98 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 CLEC3AO75596 197 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 HMGN2P05204 90 aaKnown RBP4.68□□□□□ -1.66
HMGB4-202ENST00000458277 ATP5G1P05496 136 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 GABRG2P18507 467 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 CBLN1P23435 193 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 LMO2P25791 158 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 BLVRBP30043 206 aaPredicted RBP4.68□□□□□ -1.66
HMGB4-202ENST00000458277 LTBRP36941 435 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 IER3P46695 156 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 ATP5G3P48201 142 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 NCBP2P52298 156 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB4-202ENST00000458277 DLX6P56179 175 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 RPS24P62847 133 aaKnown RBP4.68□□□□□ -1.66
HMGB4-202ENST00000458277 ATP5G2Q06055 141 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 MEF2CQ06413 473 aaPredicted RBP4.68□□□□□ -1.66
HMGB4-202ENST00000458277 ZNF146Q15072 292 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 TNXAQ16473 311 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 TAL2Q16559 108 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 SGCBQ16585 318 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 CCL15Q16663 113 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 CEACAM16Q2WEN9 425 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 PHLDA2Q53GA4 152 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 WDR38Q5JTN6 314 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 FNDC7Q5VTL7 733 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 MORN3Q6PF18 240 aaPredicted RBP4.68□□□□□ -1.66
HMGB4-202ENST00000458277 CBLN3Q6UW01 205 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB4-202ENST00000458277 ZNF683Q8IZ20 524 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 LRRC25Q8N386 305 aaPredicted RBP4.68□□□□□ -1.66
HMGB4-202ENST00000458277 RBMXL3Q8N7X1 1067 aaKnown RBP4.68□□□□□ -1.66
HMGB4-202ENST00000458277 FAM169BQ8N8A8 192 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 C1orf162Q8NEQ5 155 aaPredicted RBP4.68□□□□□ -1.66
HMGB4-202ENST00000458277 OR5D13Q8NGL4 314 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 ZNRF2Q8NHG8 242 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 OTOSQ8NHW6 89 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 GTSF1Q8WW33 167 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 PPDPFLQ8WWR9 84 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 FGF14Q92915 247 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 NKD1Q969G9 470 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 RAB37Q96AX2 223 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 TMEM59Q9BXS4 323 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 ATG10Q9H0Y0 220 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 OR10A2Q9H208 303 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 PELI2Q9HAT8 420 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 BPIFA1Q9NP55 256 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 TAS2R4Q9NYW5 299 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 HIGD1BQ9P298 99 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 HELZP42694 1942 aaKnown RBP4.68□□□□□ -1.66
HMGB4-202ENST00000458277 NINQ8N4C6 2090 aa4.68□□□□□ -1.66
HMGB4-202ENST00000458277 CXorf51AA0A1B0GTR3 108 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 MYADML2A6NDP7 307 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 C2orf70A6NJV1 201 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 NPIPB5A8MRT5 1133 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 FAM90A26D6RGX4 464 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 PRKNO60260 465 aaPredicted RBP4.67□□□□□ -1.66
HMGB4-202ENST00000458277 LEPROTL1O95214 131 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 IGHV3-7P01780 117 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 GYPBP06028 91 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 PVRP15151 417 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 ORM2P19652 201 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 SRIP30626 198 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 ZNF136P52737 540 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 EMP1P54849 157 aa4.67□□□□□ -1.66
HMGB4-202ENST00000458277 HERV-K104P61576 105 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms