RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 YIF1AO95070 293 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 ZNF134P52741 427 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 TLE4Q04727 773 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 FAM90A2PQ658T7 463 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 FAM180AQ6UWF9 173 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 ABHD14BQ96IU4 210 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 YPEL4Q96NS1 127 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 TTTY12Q9BZ98 90 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 GNG13Q9P2W3 67 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 MIOXQ9UGB7 285 aa9.86□□□□□ -0.83
SYNE2-207ENST00000458046 RBM7Q9Y580 266 aaKnown RBP9.86□□□□□ -0.83
SYNE2-207ENST00000458046 DUXBA0A1W2PPF3 345 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 DEGS1O15121 323 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 NKX2-8O15522 239 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 S100GP29377 79 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 TAS2R30P59541 319 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 PLGLB1Q02325 96 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 KIAA0141Q14154 515 aaPredicted RBP9.85□□□□□ -0.83
SYNE2-207ENST00000458046 OR1C1Q15619 314 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 TIMM23BQ5SRD1 257 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 CCDC144NLQ6NUI1 221 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 TMEM251Q8N6I4 163 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 CLDND2Q8NHS1 167 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 TCTEX1D2Q8WW35 142 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 MALSU1Q96EH3 234 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 MS4A10Q96PG2 267 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 DDA1Q9BW61 102 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 VSIRQ9H7M9 311 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 B4GALT7Q9UBV7 327 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 SIRPB1O00241 398 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 IGKV1-39P01597 117 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 IGKV1D-39P04432 117 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 CXCL1P09341 107 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 METTL15P1P0C7V9 234 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 ARR3P36575 388 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 GNG3P63215 75 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 LCN15Q6UWW0 184 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 Q8WTZ3 238 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 CACNG5Q9UF02 275 aa9.85□□□□□ -0.83
SYNE2-207ENST00000458046 ZFP92A6NM28 416 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 APLNRP35414 380 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 HLA-DRB3P79483 266 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 ZNF506Q5JVG8 444 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 SP5Q6BEB4 398 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-207ENST00000458046 H1FOOQ8IZA3 346 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-207ENST00000458046 OR10V1Q8NGI7 309 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 TVP23CQ96ET8 276 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 NIPSNAP3BQ9BS92 247 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 RPRMQ9NS64 109 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 FOXJ2Q9P0K8 574 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 TGIF2-C20orf24A0A0A6YYL0 155 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 A0A1B0GU03 582 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 SS18L1O75177 396 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-207ENST00000458046 HSPB1P04792 205 aaKnown RBP9.84□□□□□ -0.83
SYNE2-207ENST00000458046 NDUFA6P56556 154 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 ERVFRD-1P60508 538 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 ARL16Q0P5N6 197 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 SRSF6Q13247 344 aaKnown RBP9.84□□□□□ -0.83
SYNE2-207ENST00000458046 ELOBQ15370 118 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 OR8G5Q8NG78 346 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 OR13D1Q8NGV5 346 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 MRAPQ8TCY5 172 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 IL22RA2Q969J5 263 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 KCNS2Q9ULS6 477 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 X6R8D5 127 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 NBEAQ8NFP9 2946 aa9.84□□□□□ -0.83
SYNE2-207ENST00000458046 A0A1W2PR80 420 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 J3QL48 77 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 WDR1O75083 606 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 TSPAN13O95857 204 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 IGLV2-14P01704 120 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 RAB2AP61019 212 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 C8orf31Q8N9H6 132 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 OR1K1Q8NGR3 316 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 KNTC1P50748 2209 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 TNRC6BQ9UPQ9 1833 aaKnown RBP9.83□□□□□ -0.84
SYNE2-207ENST00000458046 MT-CO3P00414 261 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 TNFSF10P50591 281 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 OR2B11Q5JQS5 317 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 SCGB1C1Q8TD33 95 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 BAALCQ8WXS3 180 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 RBMXL1Q96E39 390 aaKnown RBP9.83□□□□□ -0.84
SYNE2-207ENST00000458046 OR51I2Q9H344 312 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 ZNF665Q9H7R5 613 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 PSENENQ9NZ42 101 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 TRAPPC2LQ9UL33 140 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 MPC1Q9Y5U8 109 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 LOC400499M0QZD8 3231 aa9.83□□□□□ -0.84
SYNE2-207ENST00000458046 SYNGR2O43760 224 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 IGKV1-5P01602 117 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 HBE1P02100 147 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 IDH3GP51553 393 aaPredicted RBP9.82□□□□□ -0.84
SYNE2-207ENST00000458046 PRR20EP86478 221 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 PRR20CP86479 221 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 PRR20DP86480 221 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 PRR20BP86481 221 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 PRR20AP86496 221 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 ZNF843Q8N446 348 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 TCEAL7Q9BRU2 100 aa9.82□□□□□ -0.84
SYNE2-207ENST00000458046 ASPMQ8IZT6 3477 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms