RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 SLC25A22Q9H936 323 aa13.7□□□□□ -0.22
CCDC43-202ENST00000457422 HEYLQ9NQ87 328 aaPredicted RBP13.7□□□□□ -0.22
CCDC43-202ENST00000457422 TCF19Q9Y242 345 aa13.7□□□□□ -0.22
CCDC43-202ENST00000457422 FOXA2Q9Y261 457 aaPredicted RBP13.7□□□□□ -0.22
CCDC43-202ENST00000457422 MPDU1O75352 247 aa13.7□□□□□ -0.22
CCDC43-202ENST00000457422 IFNA10P01566 189 aa13.7□□□□□ -0.22
CCDC43-202ENST00000457422 TLE1Q04724 770 aa13.7□□□□□ -0.22
CCDC43-202ENST00000457422 MEF2CQ06413 473 aaPredicted RBP13.7□□□□□ -0.22
CCDC43-202ENST00000457422 C1orf87Q8N0U7 546 aa13.7□□□□□ -0.22
CCDC43-202ENST00000457422 RHOVQ96L33 236 aa13.7□□□□□ -0.22
CCDC43-202ENST00000457422 TMEM14BQ9NUH8 114 aa13.7□□□□□ -0.22
CCDC43-202ENST00000457422 hCG_1809904A0A1W2PP81 198 aa13.69□□□□□ -0.22
CCDC43-202ENST00000457422 A0A1W2PR64 198 aa13.69□□□□□ -0.22
CCDC43-202ENST00000457422 A0A1W2PRV1 198 aa13.69□□□□□ -0.22
CCDC43-202ENST00000457422 TMPRSS2O15393 492 aa13.69□□□□□ -0.22
CCDC43-202ENST00000457422 FAM87AP0C7U9 286 aa13.69□□□□□ -0.22
CCDC43-202ENST00000457422 NDUFB7P17568 137 aa13.69□□□□□ -0.22
CCDC43-202ENST00000457422 RBPJQ06330 500 aa13.69□□□□□ -0.22
CCDC43-202ENST00000457422 OR4A47Q6IF82 309 aa13.69□□□□□ -0.22
CCDC43-202ENST00000457422 LINC00518Q8N0U6 118 aa13.69□□□□□ -0.22
CCDC43-202ENST00000457422 SAP30LQ9HAJ7 183 aa13.69□□□□□ -0.22
CCDC43-202ENST00000457422 VSTM5A8MXK1 200 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 IFNA4P05014 189 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 MEF2BQ02080 365 aaPredicted RBP13.68□□□□□ -0.22
CCDC43-202ENST00000457422 ACOT6Q3I5F7 207 aaPredicted RBP13.68□□□□□ -0.22
CCDC43-202ENST00000457422 HEPN1Q6WQI6 88 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 C1QL4Q86Z23 238 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 ZCCHC14Q8WYQ9 949 aaKnown RBP13.68□□□□□ -0.22
CCDC43-202ENST00000457422 WFIKKN1Q96NZ8 548 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 PCNX1Q96RV3 2341 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 GAL3ST2Q9H3Q3 398 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 NGBQ9NPG2 151 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 MANBALQ9NQG1 85 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 SLC25A10Q9UBX3 287 aaPredicted RBP13.68□□□□□ -0.22
CCDC43-202ENST00000457422 SEC14L6B5MCN3 397 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 TMEM178BH3BS89 294 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 RRHO14718 337 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 HMGB3O15347 200 aaKnown RBP13.68□□□□□ -0.22
CCDC43-202ENST00000457422 CYB5BO43169 146 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 HRASP01112 189 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 CD81P60033 236 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 TMEM170AQ8WVE7 144 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 RND1Q92730 232 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 RAB24Q969Q5 203 aa13.68□□□□□ -0.22
CCDC43-202ENST00000457422 ZNF727A8MUV8 499 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 IL6RP08887 468 aaPredicted RBP13.67□□□□□ -0.22
CCDC43-202ENST00000457422 HSPE1P61604 102 aaKnown RBP13.67□□□□□ -0.22
CCDC43-202ENST00000457422 TMEM249Q2WGJ8 235 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 RAB1CQ92928 201 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 VKORC1Q9BQB6 163 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 SDF2L1Q9HCN8 221 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 ZNRD1Q9P1U0 126 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 YLPM1P49750 1951 aaKnown RBP13.67□□□□□ -0.22
CCDC43-202ENST00000457422 PPIAL4EA0A075B759 164 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 PPIAL4DF5H284 164 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 TMEM250H0YL14 139 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 TNFRSF13BO14836 293 aaPredicted RBP13.67□□□□□ -0.22
CCDC43-202ENST00000457422 CT45A6P0DMU7 189 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 CT45A5P0DMU8 189 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 CT45A7P0DMV0 189 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 PPIAL4FP0DN26 164 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 PSMB3P49720 205 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 WDR25Q64LD2 544 aaPredicted RBP13.67□□□□□ -0.22
CCDC43-202ENST00000457422 TREML4Q6UXN2 200 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 COL25A1Q9BXS0 654 aaPredicted RBP13.67□□□□□ -0.22
CCDC43-202ENST00000457422 TMEM242Q9NWH2 141 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 PPIAL4AQ9Y536 164 aa13.67□□□□□ -0.22
CCDC43-202ENST00000457422 C5orf52A6NGY3 159 aa13.66□□□□□ -0.22
CCDC43-202ENST00000457422 SHISA9B4DS77 424 aa13.66□□□□□ -0.22
CCDC43-202ENST00000457422 FCN3O75636 299 aa13.66□□□□□ -0.22
CCDC43-202ENST00000457422 CDC34P49427 236 aaPredicted RBP13.66□□□□□ -0.22
CCDC43-202ENST00000457422 ERVFRD-1P60508 538 aa13.66□□□□□ -0.22
CCDC43-202ENST00000457422 RPL31P62899 125 aaKnown RBP13.66□□□□□ -0.22
CCDC43-202ENST00000457422 ELOBQ15370 118 aa13.66□□□□□ -0.22
CCDC43-202ENST00000457422 TMPRSS5Q9H3S3 457 aa13.66□□□□□ -0.22
CCDC43-202ENST00000457422 ROS1P08922 2347 aa13.66□□□□□ -0.22
CCDC43-202ENST00000457422 SMG1Q96Q15 3661 aaKnown RBP13.66□□□□□ -0.22
CCDC43-202ENST00000457422 SMCO3A2RU48 225 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 OPRK1P41145 380 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 NCMAPQ5T1S8 102 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 ZNF833PQ6ZTB9 187 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 DMRTC2Q8IXT2 367 aaPredicted RBP13.65□□□□□ -0.22
CCDC43-202ENST00000457422 ABHD12Q8N2K0 398 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 NEUROG1Q92886 237 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 RNASE6Q93091 150 aaKnown RBP13.65□□□□□ -0.22
CCDC43-202ENST00000457422 TMEM106BQ9NUM4 274 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 PTPRQQ9UMZ3 2332 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 RTL8BQ17RB0 113 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 ZNF714Q96N38 554 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 SLC35D1Q9NTN3 355 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 PRNDQ9UKY0 176 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 ZNF257Q9Y2Q1 563 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 MSRB2Q9Y3D2 182 aa13.65□□□□□ -0.22
CCDC43-202ENST00000457422 E7EQL1 145 aa13.64□□□□□ -0.23
CCDC43-202ENST00000457422 DEFA4P12838 97 aa13.64□□□□□ -0.23
CCDC43-202ENST00000457422 NPY1RP25929 384 aa13.64□□□□□ -0.23
CCDC43-202ENST00000457422 SNRPEP62304 92 aaKnown RBP13.64□□□□□ -0.23
CCDC43-202ENST00000457422 CYP2G1PQ6ZSU1 146 aa13.64□□□□□ -0.23
CCDC43-202ENST00000457422 SLC24A4Q8NFF2 622 aa13.64□□□□□ -0.23
CCDC43-202ENST00000457422 OR13D1Q8NGV5 346 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms