RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 OR4X1Q8NH49 305 aa11.77□□□□□ -0.53
SYT1-204ENST00000457153 IGHV1-18A0A0C4DH31 117 aa11.77□□□□□ -0.53
SYT1-204ENST00000457153 GCHFRP30047 84 aa11.77□□□□□ -0.53
SYT1-204ENST00000457153 SPNS3Q6ZMD2 512 aa11.77□□□□□ -0.53
SYT1-204ENST00000457153 TMEM183AQ8IXX5 376 aa11.77□□□□□ -0.53
SYT1-204ENST00000457153 OSR1Q8TAX0 266 aaPredicted RBP11.77□□□□□ -0.53
SYT1-204ENST00000457153 VAMP8Q9BV40 100 aa11.77□□□□□ -0.53
SYT1-204ENST00000457153 AURKAIP1Q9NWT8 199 aaPredicted RBP11.77□□□□□ -0.53
SYT1-204ENST00000457153 WASHC3Q9Y3C0 194 aa11.77□□□□□ -0.53
SYT1-204ENST00000457153 PAFAH1B2P68402 229 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 TNXAQ16473 311 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 WDR25Q64LD2 544 aaPredicted RBP11.76□□□□□ -0.53
SYT1-204ENST00000457153 C5orf24Q7Z6I8 188 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 NOL4LQ96MY1 436 aaPredicted RBP11.76□□□□□ -0.53
SYT1-204ENST00000457153 MRPL37Q9BZE1 423 aaKnown RBP11.76□□□□□ -0.53
SYT1-204ENST00000457153 TRBV24-1A0A075B6N3 115 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 A0A0G2JRQ6 117 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.76□□□□□ -0.53
SYT1-204ENST00000457153 CHRNB4P30926 498 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 SUMO1P63165 101 aaKnown RBP11.76□□□□□ -0.53
SYT1-204ENST00000457153 TMEM183BQ1AE95 376 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 VKORC1L1Q8N0U8 176 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 STPG3Q8N7X2 389 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 TMEM186Q96B77 213 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 DCTN5Q9BTE1 182 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 FAM103A1Q9BTL3 118 aaKnown RBP11.76□□□□□ -0.53
SYT1-204ENST00000457153 OR4A8P0C604 315 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 LMO1P25800 156 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 KRTDAPP60985 99 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 RPL23P62829 140 aaKnown RBP11.76□□□□□ -0.53
SYT1-204ENST00000457153 FAM169BQ8N8A8 192 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 RNF115Q9Y4L5 304 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 IL6RP08887 468 aaPredicted RBP11.76□□□□□ -0.53
SYT1-204ENST00000457153 MEF2CQ06413 473 aaPredicted RBP11.76□□□□□ -0.53
SYT1-204ENST00000457153 FOXC1Q12948 553 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 ACSM6Q6P461 480 aa11.76□□□□□ -0.53
SYT1-204ENST00000457153 MRPL32Q9BYC8 188 aaKnown RBP11.76□□□□□ -0.53
SYT1-204ENST00000457153 CORTO00230 105 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 C8orf88P0DMB2 117 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 HLA-DRB5Q30154 266 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 OR4A47Q6IF82 309 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 OR4C13Q8NGP0 309 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 GATAD1Q8WUU5 269 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 SFRP2Q96HF1 295 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 NUP210LQ5VU65 1888 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 SNURFLB1AK76 121 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 IGKV3-15P01624 115 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 CD99P14209 185 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 ORM2P19652 201 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 Q6ZRM9 215 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 RAB1CQ92928 201 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 INSIG2Q9Y5U4 225 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 CDX4O14627 284 aaPredicted RBP11.75□□□□□ -0.53
SYT1-204ENST00000457153 CA2P00918 260 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 ANOS1P23352 680 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 CD40P25942 277 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 PAX5Q02548 391 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 ZNF585BQ52M93 769 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 OR4F17Q8NGA8 305 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 LEAP2Q969E1 77 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 AP1S3Q96PC3 154 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 VSIRQ9H7M9 311 aa11.75□□□□□ -0.53
SYT1-204ENST00000457153 ERVK11-1P61568 191 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 NABP2Q9BQ15 211 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 RAB1BQ9H0U4 201 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 PARD6AQ9NPB6 346 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 MMD2Q8IY49 270 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 ZNF430Q9H8G1 570 aaPredicted RBP11.74□□□□□ -0.53
SYT1-204ENST00000457153 ZNF71Q9NQZ8 489 aaPredicted RBP11.74□□□□□ -0.53
SYT1-204ENST00000457153 GSN-AS1Q9NRJ2 163 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 CD55P08174 381 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 RPL30P62888 115 aaKnown RBP11.74□□□□□ -0.53
SYT1-204ENST00000457153 FOXF2Q12947 444 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 ZMAT5Q9UDW3 170 aaKnown RBP11.74□□□□□ -0.53
SYT1-204ENST00000457153 NCOR1O75376 2440 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 TRAV9-1A0A075B6T8 112 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 C15orf61A6NNL5 157 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 ZNF253O75346 499 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 HIST1H1EP10412 219 aaKnown RBP11.74□□□□□ -0.53
SYT1-204ENST00000457153 IER3P46695 156 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 COMPP49747 757 aaPredicted RBP11.74□□□□□ -0.53
SYT1-204ENST00000457153 PAX9P55771 341 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 RPP25LQ8N5L8 163 aaKnown RBP11.74□□□□□ -0.53
SYT1-204ENST00000457153 OR5AU1Q8NGC0 362 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 OR1B1Q8NGR6 318 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 PCNX3Q9H6A9 2034 aa11.74□□□□□ -0.53
SYT1-204ENST00000457153 TMEM50AO95807 157 aa11.73□□□□□ -0.53
SYT1-204ENST00000457153 RBP4P02753 201 aa11.73□□□□□ -0.53
SYT1-204ENST00000457153 LINC00869P0C866 280 aa11.73□□□□□ -0.53
SYT1-204ENST00000457153 TDGF1P13385 188 aa11.73□□□□□ -0.53
SYT1-204ENST00000457153 RAB4AP20338 218 aa11.73□□□□□ -0.53
SYT1-204ENST00000457153 FAM57AQ8TBR7 257 aa11.73□□□□□ -0.53
SYT1-204ENST00000457153 CA5BP1Q8WTZ4 195 aa11.73□□□□□ -0.53
SYT1-204ENST00000457153 AGMATQ9BSE5 352 aa11.73□□□□□ -0.53
SYT1-204ENST00000457153 DNAJC4Q9NNZ3 241 aa11.73□□□□□ -0.53
SYT1-204ENST00000457153 TRBV9A0A0B4J1U6 114 aa11.73□□□□□ -0.53
SYT1-204ENST00000457153 SPINK4O60575 86 aa11.73□□□□□ -0.53
SYT1-204ENST00000457153 OR8B3Q8NGG8 313 aa11.73□□□□□ -0.53
SYT1-204ENST00000457153 OR9G1Q8NH87 305 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms