RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 NPIPB5A8MRT5 1133 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 TNFSF12O43508 249 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 DHFRP00374 187 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 IGLV1-51P01701 117 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 PTHLHP12272 177 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 PRSS3P35030 304 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 BRWD1-AS2P59051 145 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 TAS2R31P59538 309 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 FXYD4P59646 89 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 RPL8P62917 257 aaKnown RBP13.69□□□□□ -0.22
MSH6-207ENST00000456246 ATP5G2Q06055 141 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 RPEL1Q2QD12 228 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 C10orf55Q5SWW7 151 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 WWC2-AS2Q96NR7 200 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 RSRP1Q9BUV0 290 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 FUNDC2Q9BWH2 189 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 AKIP1Q9NQ31 210 aa13.69□□□□□ -0.22
MSH6-207ENST00000456246 SMIM31A0A1B0GVY4 71 aa13.68□□□□□ -0.22
MSH6-207ENST00000456246 HPRT1P00492 218 aa13.68□□□□□ -0.22
MSH6-207ENST00000456246 APOA1P02647 267 aa13.68□□□□□ -0.22
MSH6-207ENST00000456246 FGF2P09038 288 aa13.68□□□□□ -0.22
MSH6-207ENST00000456246 ZNF735P0CB33 412 aa13.68□□□□□ -0.22
MSH6-207ENST00000456246 NAT1P18440 290 aa13.68□□□□□ -0.22
MSH6-207ENST00000456246 EXOSC2Q13868 293 aaKnown RBP13.68□□□□□ -0.22
MSH6-207ENST00000456246 POU2AF1Q16633 256 aa13.68□□□□□ -0.22
MSH6-207ENST00000456246 DHRS11Q6UWP2 260 aa13.68□□□□□ -0.22
MSH6-207ENST00000456246 TMEM17Q86X19 198 aa13.68□□□□□ -0.22
MSH6-207ENST00000456246 OR5H2Q8NGV7 314 aa13.68□□□□□ -0.22
MSH6-207ENST00000456246 SLC2A9Q9NRM0 540 aa13.68□□□□□ -0.22
MSH6-207ENST00000456246 SIGLEC8Q9NYZ4 499 aa13.68□□□□□ -0.22
MSH6-207ENST00000456246 DNAH9Q9NYC9 4486 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 MEIS3P1A6NDR6 274 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 TEX22C9J3V5 150 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 H0Y980 276 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 FCER2P06734 321 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 NQO2P16083 231 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 HLA-GP17693 338 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 SYNJ2BPP57105 145 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 ZNF818PQ6ZRF7 136 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 SSX9Q7RTT3 188 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 MOB3AQ96BX8 217 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 GPHA2Q96T91 129 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 PLEKHA2Q9HB19 425 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 COMMD9Q9P000 198 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 PEMTQ9UBM1 199 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 ADAM30Q9UKF2 790 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 U3KQK5 164 aa13.67□□□□□ -0.22
MSH6-207ENST00000456246 SULT1C2O00338 296 aa13.66□□□□□ -0.22
MSH6-207ENST00000456246 NCS1P62166 190 aa13.66□□□□□ -0.22
MSH6-207ENST00000456246 DEFA5Q01523 94 aa13.66□□□□□ -0.22
MSH6-207ENST00000456246 ZNF45Q02386 682 aa13.66□□□□□ -0.22
MSH6-207ENST00000456246 AADACL3Q5VUY0 350 aa13.66□□□□□ -0.22
MSH6-207ENST00000456246 OR4A47Q6IF82 309 aa13.66□□□□□ -0.22
MSH6-207ENST00000456246 CMTM1Q8IZ96 169 aa13.66□□□□□ -0.22
MSH6-207ENST00000456246 FYTTD1Q96QD9 318 aaKnown RBP13.66□□□□□ -0.22
MSH6-207ENST00000456246 SRSF8Q9BRL6 282 aaKnown RBP13.66□□□□□ -0.22
MSH6-207ENST00000456246 ZNF2Q9BSG1 426 aaPredicted RBP13.66□□□□□ -0.22
MSH6-207ENST00000456246 SCPEP1Q9HB40 452 aa13.66□□□□□ -0.22
MSH6-207ENST00000456246 HRASLSQ9HDD0 168 aa13.66□□□□□ -0.22
MSH6-207ENST00000456246 COMMD3Q9UBI1 195 aa13.66□□□□□ -0.22
MSH6-207ENST00000456246 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.65□□□□□ -0.22
MSH6-207ENST00000456246 HMX3A6NHT5 357 aa13.65□□□□□ -0.22
MSH6-207ENST00000456246 RBMXL2O75526 392 aaKnown RBP13.65□□□□□ -0.22
MSH6-207ENST00000456246 TRBV12-3P01733 135 aa13.65□□□□□ -0.22
MSH6-207ENST00000456246 PRH1P02810 166 aa13.65□□□□□ -0.22
MSH6-207ENST00000456246 CRYGCP07315 174 aa13.65□□□□□ -0.22
MSH6-207ENST00000456246 IL6RP08887 468 aaPredicted RBP13.65□□□□□ -0.22
MSH6-207ENST00000456246 HIST1H1BP16401 226 aaKnown RBP13.65□□□□□ -0.22
MSH6-207ENST00000456246 GNRHRP30968 328 aa13.65□□□□□ -0.22
MSH6-207ENST00000456246 RORCP51449 518 aa13.65□□□□□ -0.22
MSH6-207ENST00000456246 VBP1P61758 197 aa13.65□□□□□ -0.22
MSH6-207ENST00000456246 C15orf32Q32M92 178 aa13.65□□□□□ -0.22
MSH6-207ENST00000456246 THOC7Q6I9Y2 204 aaKnown RBP13.65□□□□□ -0.22
MSH6-207ENST00000456246 OR6F1Q8NGZ6 308 aa13.65□□□□□ -0.22
MSH6-207ENST00000456246 OR51H1Q8NH63 302 aa13.65□□□□□ -0.22
MSH6-207ENST00000456246 AP3S1Q92572 193 aa13.65□□□□□ -0.22
MSH6-207ENST00000456246 TENM3Q9P273 2699 aa13.65□□□□□ -0.22
MSH6-207ENST00000456246 OR2J3O76001 311 aa13.64□□□□□ -0.23
MSH6-207ENST00000456246 EIF4EP06730 217 aaKnown RBP13.64□□□□□ -0.23
MSH6-207ENST00000456246 PSMB6P28072 239 aa13.64□□□□□ -0.23
MSH6-207ENST00000456246 S100GP29377 79 aa13.64□□□□□ -0.23
MSH6-207ENST00000456246 RFX2P48378 723 aa13.64□□□□□ -0.23
MSH6-207ENST00000456246 ERVK-16P61578 105 aa13.64□□□□□ -0.23
MSH6-207ENST00000456246 KLK9Q2XQG4 91 aa13.64□□□□□ -0.23
MSH6-207ENST00000456246 GPX8Q8TED1 209 aa13.64□□□□□ -0.23
MSH6-207ENST00000456246 COMMD5Q9GZQ3 224 aa13.64□□□□□ -0.23
MSH6-207ENST00000456246 KLK9Q9UKQ9 250 aa13.64□□□□□ -0.23
MSH6-207ENST00000456246 STAB2Q8WWQ8 2551 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 BMPR1BO00238 502 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 GABARAPO95166 117 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 PMP2P02689 132 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 CTRB1P17538 263 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 F2RP25116 425 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 CTRB2Q6GPI1 263 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 LCN12Q6JVE5 192 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 LPCAT3Q6P1A2 487 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 MZT2AQ6P582 158 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 IL34Q6ZMJ4 242 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 CADM3Q8N126 398 aa13.63□□□□□ -0.23
MSH6-207ENST00000456246 Q8N402 240 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms