RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 BSPH1Q075Z2 132 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 BATFQ16520 125 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 LRRC75BQ2VPJ9 315 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 RPP25LQ8N5L8 163 aaKnown RBP9.95□□□□□ -0.82
SMPD4-213ENST00000454468 RBMXL3Q8N7X1 1067 aaKnown RBP9.95□□□□□ -0.82
SMPD4-213ENST00000454468 MISP3Q96FF7 219 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 RPH3ALQ9UNE2 315 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 FAM208BQ5VWN6 2430 aa9.95□□□□□ -0.82
SMPD4-213ENST00000454468 SPINK4O60575 86 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 GATA2P23769 480 aaPredicted RBP9.94□□□□□ -0.82
SMPD4-213ENST00000454468 ZNF134P52741 427 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 ODF3L1Q8IXM7 274 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 NEUROG1Q92886 237 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 PLEKHA3Q9HB20 300 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 SLC35D1Q9NTN3 355 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 A0A1B0GWJ7 208 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 NKX6-3A6NJ46 265 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 J3QW42 95 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 RRHO14718 337 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 DDTP30046 118 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 STUMQ69YW2 141 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 LINC01560Q8TB33 94 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 TMEM37Q8WXS4 190 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 C5orf30Q96GV9 206 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 PIEZO1Q92508 2521 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 PGPEP1LA6NFU8 196 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 SRRM5B3KS81 715 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.94□□□□□ -0.82
SMPD4-213ENST00000454468 KITLGP21583 273 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 COL8A2P25067 703 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 ACOT6Q3I5F7 207 aaPredicted RBP9.94□□□□□ -0.82
SMPD4-213ENST00000454468 EGLN1Q9GZT9 426 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 RYDENQ9NUL5 291 aaKnown RBP9.94□□□□□ -0.82
SMPD4-213ENST00000454468 VAX2Q9UIW0 290 aa9.94□□□□□ -0.82
SMPD4-213ENST00000454468 TRBV6-6A0A0A6YYG2 114 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 AP4M1O00189 453 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 OR7C2O60412 319 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 PRB4P10163 310 aaPredicted RBP9.93□□□□□ -0.82
SMPD4-213ENST00000454468 COX7A1P24310 79 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 DUTP33316 252 aaKnown RBP9.93□□□□□ -0.82
SMPD4-213ENST00000454468 RAB31Q13636 194 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 KHDC3LQ587J8 217 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 REC114Q7Z4M0 266 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 FAM210BQ96KR6 192 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 GAR1Q9NY12 217 aaKnown RBP9.93□□□□□ -0.82
SMPD4-213ENST00000454468 SLC25A10Q9UBX3 287 aaPredicted RBP9.93□□□□□ -0.82
SMPD4-213ENST00000454468 TNRC6BQ9UPQ9 1833 aaKnown RBP9.93□□□□□ -0.82
SMPD4-213ENST00000454468 C11orf94C9JXX5 98 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 MMP23AO75900 390 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 HPRT1P00492 218 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 IGHV1-46P01743 117 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 TNFRSF1AP19438 455 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 TCF15Q12870 199 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 GAMTQ14353 236 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 PLGLAQ15195 96 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 CDPF1Q6NVV7 123 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 C1orf87Q8N0U7 546 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 ZBTB34Q8NCN2 500 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 C1orf162Q8NEQ5 155 aaPredicted RBP9.93□□□□□ -0.82
SMPD4-213ENST00000454468 OR4S2Q8NH73 311 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 COMMD5Q9GZQ3 224 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 SAA2-SAA4A0A096LPE2 208 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 IGKV1D-33P01593 117 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 IGKV1-33P01594 117 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 SAA2P0DJI9 122 aaPredicted RBP9.93□□□□□ -0.82
SMPD4-213ENST00000454468 SRSF7Q16629 238 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMPD4-213ENST00000454468 TMEM241Q24JQ0 296 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 OR13D1Q8NGV5 346 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 FAM216AQ8WUB2 273 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 SIRT7Q9NRC8 400 aa9.93□□□□□ -0.82
SMPD4-213ENST00000454468 LOC102723971A0A1B0GUV8 181 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 MEF2BQ02080 365 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-213ENST00000454468 ZNF726P1Q15940 193 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 RNF151Q2KHN1 245 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 DOLPP1Q86YN1 238 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 Q8WTZ3 238 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 NPCDR1Q9BY65 106 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 SERTAD4Q9NUC0 356 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 TCF19Q9Y242 345 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 C5orf52A6NGY3 159 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 CLDN34H7C241 214 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 IFNL4K9M1U5 179 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 RAB29O14966 203 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 REG1AP05451 166 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 CXCL1P09341 107 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 CHRNB4P30926 498 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 FAM3BP58499 235 aaPredicted RBP9.92□□□□□ -0.82
SMPD4-213ENST00000454468 SERF2P84101 59 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 MRGPRGQ86SM5 289 aa9.92□□□□□ -0.82
SMPD4-213ENST00000454468 A0A0G2JNJ9 132 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 A8MXE2 369 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 C1QTNF9BB2RNN3 333 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 J3QR06 171 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 NDUFB4O95168 129 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 RAB4BP61018 213 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 RTL8BQ17RB0 113 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 BSXQ3C1V8 233 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 ZNF66Q6ZN08 573 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 SLC35E3Q7Z769 313 aa9.91□□□□□ -0.82
SMPD4-213ENST00000454468 LHFPL4Q7Z7J7 247 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms