RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ZFP30Q9Y2G7 519 aa3.26□□□□□ -1.89
HMGB3P21-201ENST00000452483 A8MUN3 132 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 H7BYZ3 331 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 M0R143 59 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 LST1O00453 97 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 LMX1BO60663 402 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 PATE4P0C8F1 98 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF705DP0CH99 300 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 RBMXP38159 391 aaKnown RBP3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 EIF2B2P49770 351 aaKnown RBP3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 PSG7Q13046 419 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 RTL8BQ17RB0 113 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 GLYATL3Q5SZD4 288 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 TEX261Q6UWH6 196 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 LINC01551Q86U37 167 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF664Q8N3J9 261 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 ACBD7Q8N6N7 88 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF555Q8NEP9 628 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 OR52R1Q8NGF1 315 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 FAM57AQ8TBR7 257 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 LMX1AQ8TE12 382 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 C7orf33Q8WU49 177 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 CARD19Q96LW7 228 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 SPIN2AQ99865 258 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 SPIN2BQ9BPZ2 258 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 SLC25A21Q9BQT8 299 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 TMEM204Q9BSN7 226 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 PSMG3Q9BT73 122 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 RTL8AQ9BWD3 113 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 GGTLC1Q9BX51 225 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 CST9LQ9H4G1 147 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 NAT8Q9UHE5 227 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 ATRNO75882 1429 aa3.25□□□□□ -1.89
HMGB3P21-201ENST00000452483 HECW1Q76N89 1606 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 IGLV7-46A0A075B6I9 117 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 IGHV1-45A0A0A0MS14 117 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 TRAV38-1A0A0B4J264 116 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 GABARAPH6UMI1 98 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 UBE2L6O14933 153 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 FSTL3O95633 263 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 IGLV3-27P01718 113 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 HLA-DQB1P01920 261 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 SEC11BP0C7V7 166 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 DAPP51397 102 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 RPS11P62280 158 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 HOXC5Q00444 222 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 EIF3IQ13347 325 aaKnown RBP3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 MPV17L2Q567V2 206 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 LAIR2Q6ISS4 152 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 GUSBP11Q6P575 273 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 IFT20Q8IY31 132 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZDHHC22Q8N966 263 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 SGMS2Q8NHU3 365 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 FNDC9Q8TBE3 224 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF721Q8TF20 911 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 C2orf15Q8WU43 125 aaKnown RBP3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 TMEM190Q8WZ59 177 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 TOMM6Q96B49 74 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 CMBLQ96DG6 245 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 VSIG2Q96IQ7 327 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 C2orf50Q96LR7 162 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 AICDAQ9GZX7 198 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 HEXA-AS1Q9H8Q6 139 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 PLEKHF2Q9H8W4 249 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 EFCAB1Q9HAE3 211 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 FGF22Q9HCT0 170 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 CA10Q9NS85 328 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 CKLFQ9UBR5 152 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 CACNG5Q9UF02 275 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF609O15014 1411 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 DOCK6Q96HP0 2047 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 THSD7AQ9UPZ6 1657 aa3.24□□□□□ -1.89
HMGB3P21-201ENST00000452483 ADAMTSL1Q8N6G6 1762 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 IGKV6-21A0A0C4DH24 114 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 KRTAP16-1A8MUX0 517 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 KRTAP29-1A8MX34 341 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 KRTAP4-16G5E9R7 235 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 LYZL6O75951 148 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 LTAP01374 205 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 IGHV3-23P01764 117 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 MT-ND4LP03901 98 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 PAEPP09466 180 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 INAFM2P0DMQ5 153 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 NFYBP25208 207 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 FKBP2P26885 142 aaKnown RBP3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 CXCL12P48061 93 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 DIO3P55073 304 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 LINC00205P59089 165 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 TAS2R20P59543 309 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 GNB1P62873 340 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 KIAA0040Q15053 153 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 LINC00303Q3SY05 128 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 VMA21Q3ZAQ7 101 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 ZNF876PQ49A33 203 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 FMN1Q68DA7 1419 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 CTAGE3PQ8IX95 158 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 LYG1Q8N1E2 194 aa3.23□□□□□ -1.89
HMGB3P21-201ENST00000452483 SLC25A29Q8N8R3 303 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 315.4 ms