RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 SLC25A6P12236 298 aa10.06□□□□□ -0.8
COL27A1-202ENST00000451716 SPINK9Q5DT21 86 aa10.06□□□□□ -0.8
COL27A1-202ENST00000451716 SPSB3Q6PJ21 355 aa10.06□□□□□ -0.8
COL27A1-202ENST00000451716 DFFBO76075 338 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 CRYAAP02489 173 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 PAX5Q02548 391 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 COL5A1-AS1Q5SY13 56 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 FAM180AQ6UWF9 173 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 SNIP1Q8TAD8 396 aaKnown RBP10.05□□□□□ -0.8
COL27A1-202ENST00000451716 RBMXL1Q96E39 390 aaKnown RBP10.05□□□□□ -0.8
COL27A1-202ENST00000451716 WSB1Q9Y6I7 421 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 LINC00473A8K010 186 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 GCSAMQ8N6F7 178 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 PRR7Q8TB68 274 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 MUCL1Q96DR8 90 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 PCGF1Q9BSM1 259 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 VSIRQ9H7M9 311 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 KPTNQ9Y664 436 aa10.05□□□□□ -0.8
COL27A1-202ENST00000451716 TLN1Q9Y490 2541 aaKnown RBP10.05□□□□□ -0.8
COL27A1-202ENST00000451716 ZNF320A2RRD8 509 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 UMAD1C9J7I0 102 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 ATXN7O15265 892 aaPredicted RBP10.04□□□□□ -0.8
COL27A1-202ENST00000451716 OR2C1O95371 312 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 TIMM23BQ5SRD1 257 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 UTF1Q5T230 341 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 FAM234AQ9H0X4 552 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 NBASA2RRP1 2371 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 DSCAMO60469 2012 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 ZNF737O75373 536 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 CLDN1O95832 211 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 IFNA5P01569 189 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 WNT2P09544 360 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 EDDM3BP56851 147 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 TAS2R30P59541 319 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 UBE2KP61086 200 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 COMMD1Q8N668 190 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 ITLN1Q8WWA0 313 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 GNPNAT1Q96EK6 184 aaPredicted RBP10.04□□□□□ -0.8
COL27A1-202ENST00000451716 CHODLQ9H9P2 273 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 CLN8Q9UBY8 286 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 CHD8Q9HCK8 2581 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 SPTA1P02549 2419 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 RNF212BA8MTL3 300 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 SRRM5B3KS81 715 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 F6UZH7 168 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 IFNL4K9M1U5 179 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 CD55P08174 381 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 RIPPLY3P57055 190 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 UBE2V1Q13404 147 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 EIF4EBP1Q13541 118 aaPredicted RBP10.04□□□□□ -0.8
COL27A1-202ENST00000451716 DUX4L9Q6RFH8 374 aaPredicted RBP10.04□□□□□ -0.8
COL27A1-202ENST00000451716 MRPL52Q86TS9 123 aaKnown RBP10.04□□□□□ -0.8
COL27A1-202ENST00000451716 WFDC8Q8IUA0 241 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 SMIM12Q96EX1 92 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 PBDC1Q9BVG4 233 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 RBKSQ9H477 322 aa10.04□□□□□ -0.8
COL27A1-202ENST00000451716 ODAMA1E959 279 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 C15orf65H3BRN8 121 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 RBMXL2O75526 392 aaKnown RBP10.03□□□□□ -0.8
COL27A1-202ENST00000451716 MAS1LP35410 378 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 LDLRAD2Q5SZI1 272 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 TGIF2LYQ8IUE0 185 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 DEFB108BQ8NET1 73 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 LEAP2Q969E1 77 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 ZDHHC16Q969W1 377 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 SLC35B3Q9H1N7 401 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 RBFOX3A6NFN3 312 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 TRGC2P03986 189 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 ZNF525Q8N782 197 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 OR4C5Q8NGB2 326 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 RNASEH2CQ8TDP1 164 aaKnown RBP10.03□□□□□ -0.8
COL27A1-202ENST00000451716 ABHD17AQ96GS6 310 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 AGMATQ9BSE5 352 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 GNG12Q9UBI6 72 aa10.03□□□□□ -0.8
COL27A1-202ENST00000451716 SPINT2O43291 252 aa10.02□□□□□ -0.8
COL27A1-202ENST00000451716 PROP1O75360 226 aa10.02□□□□□ -0.8
COL27A1-202ENST00000451716 OCIAD2Q56VL3 154 aa10.02□□□□□ -0.8
COL27A1-202ENST00000451716 OR2D3Q8NGH3 330 aa10.02□□□□□ -0.8
COL27A1-202ENST00000451716 SCGB1C1Q8TD33 95 aa10.02□□□□□ -0.8
COL27A1-202ENST00000451716 ZNF479Q96JC4 524 aa10.02□□□□□ -0.8
COL27A1-202ENST00000451716 OR4C12Q96R67 309 aa10.02□□□□□ -0.8
COL27A1-202ENST00000451716 RPRMQ9NS64 109 aa10.02□□□□□ -0.8
COL27A1-202ENST00000451716 GCGP01275 180 aa10.02□□□□□ -0.81
COL27A1-202ENST00000451716 TRGC1P0CF51 173 aa10.02□□□□□ -0.81
COL27A1-202ENST00000451716 GLRXP35754 106 aa10.02□□□□□ -0.81
COL27A1-202ENST00000451716 CATR1Q13166 79 aa10.02□□□□□ -0.81
COL27A1-202ENST00000451716 CISD2Q8N5K1 135 aaKnown RBP10.02□□□□□ -0.81
COL27A1-202ENST00000451716 FAM169BQ8N8A8 192 aa10.02□□□□□ -0.81
COL27A1-202ENST00000451716 TPRP12270 2363 aaKnown RBP10.02□□□□□ -0.81
COL27A1-202ENST00000451716 UBE2L5PA0A1B0GUS4 154 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 ZG16O60844 167 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 AMBPP02760 352 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 PF4V1P10720 104 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 TIMP3P35625 211 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 ELLP55199 621 aaPredicted RBP10.01□□□□□ -0.81
COL27A1-202ENST00000451716 RPS23P62266 143 aaKnown RBP10.01□□□□□ -0.81
COL27A1-202ENST00000451716 RPL39P5Q59GN2 51 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 C1orf194Q5T5A4 169 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 LCN15Q6UWW0 184 aa10.01□□□□□ -0.81
COL27A1-202ENST00000451716 LFNGQ8NES3 379 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms