RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 C5orf56Q8N8D9 126 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 Q8N9W7 124 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 OR4C13Q8NGP0 309 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 LSM10Q969L4 123 aaKnown RBP10.36□□□□□ -0.75
VPS33A-202ENST00000451053 FLYWCH2Q96CP2 140 aaKnown RBP10.36□□□□□ -0.75
VPS33A-202ENST00000451053 C19orf24Q9BVV8 132 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 NPFFR1Q9GZQ6 430 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 ZNF702PQ9H963 129 aa10.36□□□□□ -0.75
VPS33A-202ENST00000451053 M0QZK8 103 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 FGF16O43320 207 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 PFDN1O60925 122 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 CCNKO75909 580 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 S1PR2O95136 353 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 NDUFA7O95182 113 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 IGLV2-23P01705 113 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 HOXB5P09067 269 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 HKR1P10072 659 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 NQO2P16083 231 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 CYCSP99999 105 aaKnown RBP10.35□□□□□ -0.75
VPS33A-202ENST00000451053 THOC7Q6I9Y2 204 aaKnown RBP10.35□□□□□ -0.75
VPS33A-202ENST00000451053 LYZL2Q7Z4W2 148 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 FAM71E2Q8N5Q1 922 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 NPBQ8NG41 125 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 OR11H7Q8NGC8 314 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 OR8H1Q8NGG4 311 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 LHFPL5Q8TAF8 219 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 R3HDM4Q96D70 268 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 HARBI1Q96MB7 349 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 RNF5Q99942 180 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 PDCD10Q9BUL8 212 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 ZNF436Q9C0F3 470 aaPredicted RBP10.35□□□□□ -0.75
VPS33A-202ENST00000451053 RANBP3Q9H6Z4 567 aaPredicted RBP10.35□□□□□ -0.75
VPS33A-202ENST00000451053 SIGLEC9Q9Y336 463 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 MMP24Q9Y5R2 645 aa10.35□□□□□ -0.75
VPS33A-202ENST00000451053 C5orf51A6NDU8 294 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 MARCH11A6NNE9 402 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 SRRM4A7MD48 611 aaKnown RBP10.34□□□□□ -0.75
VPS33A-202ENST00000451053 FAM25EA8MYX2 175 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 RRHO14718 337 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 SHOXO15266 292 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 ADAP1O75689 374 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 TSPAN9O75954 239 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 NDUFA3O95167 84 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 GIPP09681 153 aaPredicted RBP10.34□□□□□ -0.75
VPS33A-202ENST00000451053 SLC25A6P12236 298 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 PSG5Q15238 335 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 POU2AF1Q16633 256 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 C9orf152Q5JTZ5 239 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 GGNBP1Q5YKI7 109 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 H2BFWTQ7Z2G1 175 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 DMBX1Q8NFW5 382 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 TMEM158Q8WZ71 300 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 C2orf50Q96LR7 162 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 TSNAXQ99598 290 aaKnown RBP10.34□□□□□ -0.75
VPS33A-202ENST00000451053 FBXL15Q9H469 300 aa10.34□□□□□ -0.75
VPS33A-202ENST00000451053 C2CD3Q4AC94 2353 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 A0A1B0GU03 582 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 C13orf42A0A1B0GVH6 325 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 CCSO14618 274 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 SLC25A17O43808 307 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 KRASP01116 189 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 IGKV1-39P01597 117 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 IGKV1D-39P04432 117 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 CXCL3P19876 107 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 MDKP21741 143 aaPredicted RBP10.33□□□□□ -0.76
VPS33A-202ENST00000451053 LGALS7P47929 136 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 RAP2BP61225 183 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 C5orf64Q2M2E5 130 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 IAH1Q2TAA2 248 aaPredicted RBP10.33□□□□□ -0.76
VPS33A-202ENST00000451053 TMEM95Q3KNT9 176 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 NMSQ5H8A3 153 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 Q8N2B8 174 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 VSTM2AQ8TAG5 236 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 SEC22AQ96IW7 307 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 RHOVQ96L33 236 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 RASL11BQ9BPW5 248 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 NMES1Q9C002 83 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 PRSS22Q9GZN4 317 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 C16orf95Q9H693 158 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 TPSG1Q9NRR2 321 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 ZFP57Q9NU63 452 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 KIAA1456Q9P272 454 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 METTL1Q9UBP6 276 aaKnown RBP10.33□□□□□ -0.76
VPS33A-202ENST00000451053 CACFD1Q9UGQ2 172 aa10.33□□□□□ -0.76
VPS33A-202ENST00000451053 TMEM89A2RUT3 159 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 OR2A4O95047 310 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 SPDEFO95238 335 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 IGKV1-5P01602 117 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 CRYGBP07316 175 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 G6PCP35575 357 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 H2BFSP57053 126 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 CD83Q01151 205 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 SRSF4Q08170 494 aaKnown RBP10.32□□□□□ -0.76
VPS33A-202ENST00000451053 SMCO1Q147U7 214 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 PLGLAQ15195 96 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 C2orf68Q2NKX9 166 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 VMA21Q3ZAQ7 101 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 VKORC1L1Q8N0U8 176 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 OR4F5Q8NH21 305 aa10.32□□□□□ -0.76
VPS33A-202ENST00000451053 LINC01006Q8NI28 216 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms