RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 ZNF257Q9Y2Q1 563 aa14.82□□□□□ -0.04
USP40-207ENST00000450940 A0A1B0GW64 132 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 MEIS3P1A6NDR6 274 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 E7EUB6 86 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 FCER2P06734 321 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 ZNF735P0CB33 412 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 RPL27AP46776 148 aaKnown RBP14.81□□□□□ -0.04
USP40-207ENST00000450940 POU2AF1Q16633 256 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 TMEM69Q5SWH9 247 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 SPAG16Q8N0X2 631 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 NECAP1Q8NC96 275 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 OR9G4Q8NGQ1 327 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 OR4A5Q8NH83 315 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 CMTM3Q96MX0 182 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 FUNDC2Q9BWH2 189 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 SLC2A9Q9NRM0 540 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 BET1LQ9NYM9 111 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 SIGLEC8Q9NYZ4 499 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 U3KQK5 164 aa14.81□□□□□ -0.04
USP40-207ENST00000450940 HMX3A6NHT5 357 aa14.8□□□□□ -0.04
USP40-207ENST00000450940 NPIPB5A8MRT5 1133 aa14.8□□□□□ -0.04
USP40-207ENST00000450940 TNFSF12O43508 249 aa14.8□□□□□ -0.04
USP40-207ENST00000450940 PRH1P02810 166 aa14.8□□□□□ -0.04
USP40-207ENST00000450940 CRYGCP07315 174 aa14.8□□□□□ -0.04
USP40-207ENST00000450940 SYNJ2BPP57105 145 aa14.8□□□□□ -0.04
USP40-207ENST00000450940 ATP5G2Q06055 141 aa14.8□□□□□ -0.04
USP40-207ENST00000450940 ZNF818PQ6ZRF7 136 aa14.8□□□□□ -0.04
USP40-207ENST00000450940 IFT46Q9NQC8 304 aa14.8□□□□□ -0.04
USP40-207ENST00000450940 ADAM30Q9UKF2 790 aa14.8□□□□□ -0.04
USP40-207ENST00000450940 STAB2Q8WWQ8 2551 aa14.8□□□□□ -0.04
USP40-207ENST00000450940 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.79□□□□□ -0.04
USP40-207ENST00000450940 HPRT1P00492 218 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 GNRHRP30968 328 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 RFX2P48378 723 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 TAS2R31P59538 309 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 FXYD4P59646 89 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 NCS1P62166 190 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 RPL8P62917 257 aaKnown RBP14.79□□□□□ -0.04
USP40-207ENST00000450940 CATR1Q13166 79 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 TATDN3Q17R31 274 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 FAM209BQ5JX69 171 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 OR4A47Q6IF82 309 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 ANKRD13BQ86YJ7 626 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 BORCS5Q969J3 196 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 EHFQ9NZC4 300 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 DMRT1Q9Y5R6 373 aa14.79□□□□□ -0.04
USP40-207ENST00000450940 BMPR1BO00238 502 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 SULT1C2O00338 296 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 APOA1P02647 267 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 CSN3P07498 182 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 FGF2P09038 288 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 PRSS3P35030 304 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 TAS2R46P59540 309 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 EXOSC2Q13868 293 aaKnown RBP14.78□□□□□ -0.04
USP40-207ENST00000450940 RPEL1Q2QD12 228 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 SSX9Q7RTT3 188 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 LYSMD2Q8IV50 215 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 Q8N1Y9 231 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 CD300LFQ8TDQ1 290 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 MOB3AQ96BX8 217 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 ASCL2Q99929 193 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 PLEKHA2Q9HB19 425 aa14.78□□□□□ -0.04
USP40-207ENST00000450940 CGB1A6NKQ9 187 aa14.77□□□□□ -0.05
USP40-207ENST00000450940 EIF4EP06730 217 aaKnown RBP14.77□□□□□ -0.05
USP40-207ENST00000450940 NQO2P16083 231 aa14.77□□□□□ -0.05
USP40-207ENST00000450940 HLA-GP17693 338 aa14.77□□□□□ -0.05
USP40-207ENST00000450940 MECP2P51608 486 aaKnown RBP14.77□□□□□ -0.05
USP40-207ENST00000450940 HERV-K104P61576 105 aa14.77□□□□□ -0.05
USP40-207ENST00000450940 VBP1P61758 197 aa14.77□□□□□ -0.05
USP40-207ENST00000450940 C15orf32Q32M92 178 aa14.77□□□□□ -0.05
USP40-207ENST00000450940 HAPLN4Q86UW8 402 aa14.77□□□□□ -0.05
USP40-207ENST00000450940 TMEM17Q86X19 198 aa14.77□□□□□ -0.05
USP40-207ENST00000450940 GPX8Q8TED1 209 aa14.77□□□□□ -0.05
USP40-207ENST00000450940 FANCD2OSQ96PS1 177 aa14.77□□□□□ -0.05
USP40-207ENST00000450940 FYTTD1Q96QD9 318 aaKnown RBP14.77□□□□□ -0.05
USP40-207ENST00000450940 RSRP1Q9BUV0 290 aa14.77□□□□□ -0.05
USP40-207ENST00000450940 HUWE1Q7Z6Z7 4374 aaKnown RBP14.77□□□□□ -0.05
USP40-207ENST00000450940 A8MZ25 164 aa14.76□□□□□ -0.05
USP40-207ENST00000450940 OR2J3O76001 311 aa14.76□□□□□ -0.05
USP40-207ENST00000450940 FRMD6-AS1P0C7T7 363 aa14.76□□□□□ -0.05
USP40-207ENST00000450940 AREGP15514 252 aa14.76□□□□□ -0.05
USP40-207ENST00000450940 CTRB1P17538 263 aa14.76□□□□□ -0.05
USP40-207ENST00000450940 PSMB6P28072 239 aa14.76□□□□□ -0.05
USP40-207ENST00000450940 OR2B8PP59922 312 aa14.76□□□□□ -0.05
USP40-207ENST00000450940 CTRB2Q6GPI1 263 aa14.76□□□□□ -0.05
USP40-207ENST00000450940 SBSPONQ8IVN8 264 aa14.76□□□□□ -0.05
USP40-207ENST00000450940 ZNF2Q9BSG1 426 aaPredicted RBP14.76□□□□□ -0.05
USP40-207ENST00000450940 COMMD3Q9UBI1 195 aa14.76□□□□□ -0.05
USP40-207ENST00000450940 BOLA1Q9Y3E2 137 aa14.76□□□□□ -0.05
USP40-207ENST00000450940 DPPA5A6NC42 116 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 H0Y980 276 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 UPK2O00526 184 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 PGLYRP1O75594 196 aaPredicted RBP14.75□□□□□ -0.05
USP40-207ENST00000450940 PMP2P02689 132 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 MYOD1P15172 320 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 C19orf35Q6ZS72 473 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 CADM3Q8N126 398 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 OR5H2Q8NGV7 314 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 OR51H1Q8NH63 302 aa14.75□□□□□ -0.05
USP40-207ENST00000450940 THAP7Q9BT49 309 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms