RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 C4orf51C9J302 202 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 AP4M1O00189 453 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 COX6CP09669 75 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 ASIPP42127 132 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 RUNX1Q01196 453 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 TMEM219Q86XT9 240 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 LINC00470Q9BZP3 86 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 ABCA7Q8IZY2 2146 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 ZNF146Q15072 292 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 BEND2Q8NDZ0 799 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 AMELYQ99218 206 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 HSF4Q9ULV5 492 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 M0QZK8 103 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 UMODP07911 640 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 SPRR3Q9UBC9 169 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 ZNF318Q5VUA4 2279 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 RAMP1O60894 148 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 SNRNP200O75643 2136 aaKnown RBP10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 MAPK1IP1LQ8NDC0 245 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 COPS9Q8WXC6 57 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 C21orf62Q9NYP8 219 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 COL24A1Q17RW2 1714 aa10.8□□□□□ -0.68
AC006001.3-201ENST00000449307 NDUFB4O95168 129 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 WNT2P09544 360 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 ICAM4Q14773 271 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 TMEM30BQ3MIR4 351 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 RPRMQ9NS64 109 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 KCNK7Q9Y2U2 307 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 H7C1H1 209 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 CCL3L1P16619 93 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 ATP6V0CP27449 155 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 TM4SF5O14894 197 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 RPL24P83731 157 aaKnown RBP10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 DTX2Q86UW9 622 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 SDF2L1Q9HCN8 221 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 TRPM7Q96QT4 1865 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 LOC107984156A0A0G2JMH3 177 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 ARL14EPLP0DKL9 152 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 ERGP11308 486 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 RIPPLY3P57055 190 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 ARL17AQ8IVW1 177 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 MSGN1A6NI15 193 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 PNRC1Q12796 327 aaPredicted RBP10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 FAM74A3Q4VXF1 159 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 DNLZQ5SXM8 178 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 Q6ZNX1 250 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 GPR146Q96CH1 333 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 WFIKKN1Q96NZ8 548 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 MRPL20Q9BYC9 149 aaKnown RBP10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 PRO1933Q9H354 126 aa10.79□□□□□ -0.68
AC006001.3-201ENST00000449307 TMEM8BA6NDV4 472 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 RNF223E7ERA6 249 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 SAXO1Q8IYX7 474 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 CTDSPLO15194 276 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 C1QCP02747 245 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 C10orf128Q5T292 105 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 C20orf204Q6ZNR8 217 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 CDC42EP3Q9UKI2 254 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 TCF19Q9Y242 345 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 SIPA1L3O60292 1781 aaPredicted RBP10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 EIF3GO75821 320 aaKnown RBP eCLIP10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 RP1P56715 2156 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 TRBV20OR9-2A0A075B6H5 130 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 SAMD13Q5VXD3 122 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 TCF20Q9UGU0 1960 aaKnown RBP10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 C1QTNF9BB2RNN3 333 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 C1QTNF9P0C862 333 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 C11orf91Q3C1V1 193 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 FOXB2Q5VYV0 432 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 OR5AN1Q8NGI8 311 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 Q96MF0 132 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 C11orf68Q9H3H3 251 aaKnown RBP10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 ARFGEF1Q9Y6D6 1849 aa10.78□□□□□ -0.68
AC006001.3-201ENST00000449307 ZNF688P0C7X2 276 aa10.77□□□□□ -0.68
AC006001.3-201ENST00000449307 MUC21Q5SSG8 566 aa10.77□□□□□ -0.68
AC006001.3-201ENST00000449307 SELENOHQ8IZQ5 122 aaKnown RBP10.77□□□□□ -0.68
AC006001.3-201ENST00000449307 MUC21A0A0G2JKD1 596 aa10.77□□□□□ -0.68
AC006001.3-201ENST00000449307 MUC21A0A140T8X8 626 aa10.77□□□□□ -0.68
AC006001.3-201ENST00000449307 TMEM238LA0A1B0GVL6 79 aa10.77□□□□□ -0.68
AC006001.3-201ENST00000449307 A6NJY4 79 aa10.77□□□□□ -0.68
AC006001.3-201ENST00000449307 GREM1O60565 184 aa10.77□□□□□ -0.68
AC006001.3-201ENST00000449307 TMEM42Q69YG0 159 aa10.77□□□□□ -0.68
AC006001.3-201ENST00000449307 DPPA3Q6W0C5 159 aa10.77□□□□□ -0.68
AC006001.3-201ENST00000449307 VMO1Q7Z5L0 202 aa10.77□□□□□ -0.68
AC006001.3-201ENST00000449307 BEX4Q9NWD9 120 aaPredicted RBP10.77□□□□□ -0.68
AC006001.3-201ENST00000449307 IGLV1-36A0A0B4J1U3 117 aa10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 C8orf88P0DMB2 117 aa10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 Q0VFX4 171 aa10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 BRD3OSQ6XYD6 125 aa10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 FAM110DQ8TAY7 271 aaPredicted RBP10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 FAM206AQ9NX38 181 aa10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 CABIN1Q9Y6J0 2220 aa10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 C7orf71A4D174 169 aa10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 PRR32B1ATL7 298 aa10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 COX19Q49B96 90 aa10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 LINC00299Q6ZSB3 139 aa10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 NRIP2Q9BQI9 281 aa10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 CD7P09564 240 aa10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 SRSF6Q13247 344 aaKnown RBP10.77□□□□□ -0.69
AC006001.3-201ENST00000449307 UBE2V2Q15819 145 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms