RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TXNL1O43396 289 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 CRYZL1O95825 349 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 PTTG1O95997 202 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 IGKV1-16P04430 117 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 OR5AC1P0C628 307 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 NHLRC4P0CG21 123 aaPredicted RBP10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 RPA2P15927 270 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 F2RP25116 425 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 CATR1Q13166 79 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 PPP1R1AQ13522 171 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 RGS21Q2M5E4 152 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 ZNF585BQ52M93 769 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 C8orf86Q6ZUL3 223 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 ZNF695Q8IW36 515 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 SPAG16Q8N0X2 631 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 STPG2Q8N412 459 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 CCDC71LQ8N9Z2 235 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 KLHL30-AS1Q8NEE0 82 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 DUSP18Q8NEJ0 188 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 OR52B4Q8NGK2 314 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 ADTRPQ96IZ2 230 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 SCGB3A2Q96PL1 93 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 SEC22CQ9BRL7 303 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 NAA60Q9H7X0 242 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 WASHC3Q9Y3C0 194 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 NUBP2Q9Y5Y2 271 aa10.78□□□□□ -0.68
PDLIM2-213ENST00000448520 C3orf85A0A1B0GTC6 90 aa10.77□□□□□ -0.69
PDLIM2-213ENST00000448520 CCL24O00175 119 aa10.77□□□□□ -0.69
PDLIM2-213ENST00000448520 AP4M1O00189 453 aa10.77□□□□□ -0.69
PDLIM2-213ENST00000448520 APOA2P02652 100 aa10.77□□□□□ -0.69
PDLIM2-213ENST00000448520 VAMP1P23763 118 aa10.77□□□□□ -0.69
PDLIM2-213ENST00000448520 LPAR6P43657 344 aa10.77□□□□□ -0.69
PDLIM2-213ENST00000448520 PLET1Q6UQ28 207 aa10.77□□□□□ -0.69
PDLIM2-213ENST00000448520 SLC25A42Q86VD7 318 aa10.77□□□□□ -0.69
PDLIM2-213ENST00000448520 EAF1Q96JC9 268 aaPredicted RBP10.77□□□□□ -0.69
PDLIM2-213ENST00000448520 DNAH9Q9NYC9 4486 aa10.77□□□□□ -0.69
PDLIM2-213ENST00000448520 SORL1Q92673 2214 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 NCBP2LA6PVI3 153 aaKnown RBP10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 INMT-MINDY4F8WBC2 141 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 H0Y980 276 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 S1PR2O95136 353 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 IGKV1-39P01597 117 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 IGKV1D-39P04432 117 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 CD1BP29016 333 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 S100GP29377 79 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 UBE2MP61081 183 aaKnown RBP10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 DHODHQ02127 395 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 C18orf65Q6ZTR6 163 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 SGPP2Q8IWX5 399 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 VKORC1L1Q8N0U8 176 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 OR2T10Q8NGZ9 312 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 LHFPL5Q8TAF8 219 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 CASTOR1Q8WTX7 329 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 LIN7CQ9NUP9 197 aaKnown RBP10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 LINC00527Q9UJ94 153 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 PRELID3BQ9Y3B1 194 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 TENM3Q9P273 2699 aa10.76□□□□□ -0.69
PDLIM2-213ENST00000448520 A0A0B4J293 547 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 SRRM4A7MD48 611 aaKnown RBP10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 SFT2D2O95562 160 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 MOSP00540 346 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 ELANEP08246 267 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 OR4E1P0C645 316 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 CDX1P47902 265 aaPredicted RBP10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 F2RL1P55085 397 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 TAS2R31P59538 309 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 RPS16P62249 146 aaKnown RBP10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 TMEM187Q14656 261 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 OXA1LQ15070 435 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 RTL8BQ17RB0 113 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 TRIM16LQ309B1 348 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 ANKRD55Q3KP44 614 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 C4orf46Q504U0 113 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 TMEM128Q5BJH2 165 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 CXorf66Q5JRM2 361 aaPredicted RBP10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 LIN54Q6MZP7 749 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 PDPNQ86YL7 162 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 Q8N6K4 173 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 OR8H1Q8NGG4 311 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 GLYATL2Q8WU03 294 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 MARVELD1Q9BSK0 173 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 TPSG1Q9NRR2 321 aa10.75□□□□□ -0.69
PDLIM2-213ENST00000448520 C9orf170A2RU37 121 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 LINC01548A6NM66 108 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 SHOXO15266 292 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 IGLV2-23P01705 113 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 HLA-AP01891 365 aaKnown RBP10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 UCP1P25874 307 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 MC5RP33032 325 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 KIR2DS2P43631 304 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 MECP2P51608 486 aaKnown RBP10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 DHRS2Q13268 280 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 FOXE3Q13461 319 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 IZUMO4Q1ZYL8 232 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 TMEM177Q53S58 311 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 C9orf66Q5T8R8 295 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 SSX9Q7RTT3 188 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 LYG2Q86SG7 212 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 RNF152Q8N8N0 203 aa10.74□□□□□ -0.69
PDLIM2-213ENST00000448520 Q8N9W7 124 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms