RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 KRASP01116 189 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 IGKV1-39P01597 117 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 IGKV1D-39P04432 117 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 IL6RP08887 468 aaPredicted RBP5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 OR4E1P0C645 316 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 SAA1P0DJI8 122 aaPredicted RBP5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 RPA2P15927 270 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 UCP1P25874 307 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 G6PCP35575 357 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 MECP2P51608 486 aaKnown RBP5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 PJVKQ0ZLH3 352 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 PPP1R1AQ13522 171 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 TMEM187Q14656 261 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 POU2AF1Q16633 256 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 MRGPRG-AS1Q2M3A8 158 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 TRIM16LQ309B1 348 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 VMA21Q3ZAQ7 101 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 PLET1Q6UQ28 207 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 Q6ZSV7 163 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 PPP1R27Q86WC6 154 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 SELENOHQ8IZQ5 122 aaKnown RBP5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 PUSL1Q8N0Z8 303 aaKnown RBP5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 CADM3Q8N126 398 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 Q8N2B8 174 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 R3HDM4Q96D70 268 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 SEC22AQ96IW7 307 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 TMEM56Q96MV1 263 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 OR2A7Q96R45 310 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 CLCC1Q96S66 551 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 PRSS22Q9GZN4 317 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 FBXL15Q9H469 300 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 BEX1Q9HBH7 125 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 COMMD9Q9P000 198 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 TMEM56-RWDD3S4R434 201 aa5.98□□□□□ -1.45
AC004540.1-206ENST00000448056 LINC01548A6NM66 108 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 MARCH11A6NNE9 402 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 NDUFA7O95182 113 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 PTTG1O95997 202 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 HLA-DRB1P01911 266 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 HKR1P10072 659 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 ANXA3P12429 323 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 SPNP16150 400 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 RAG2P55895 527 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 RAB25P57735 213 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 ERVK-16P61578 105 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 CX3CL1P78423 397 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 PLGLAQ15195 96 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 PRSS8Q16651 343 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 ANKRD55Q3KP44 614 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 C4orf46Q504U0 113 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 OR4A47Q6IF82 309 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 ZNF562Q6V9R5 426 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 SSX9Q7RTT3 188 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 ZNF695Q8IW36 515 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 LGI3Q8N145 548 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 DMBX1Q8NFW5 382 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 OR4A5Q8NH83 315 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 LHFPL5Q8TAF8 219 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 VSTM2AQ8TAG5 236 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 TMEM167AQ8TBQ9 72 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 CASTOR1Q8WTX7 329 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 RBPMSQ93062 196 aaKnown RBP5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 MARVELD1Q9BSK0 173 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 C16orf95Q9H693 158 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 RANBP3Q9H6Z4 567 aaPredicted RBP5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 ZNF702PQ9H963 129 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 BET1LQ9NYM9 111 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 PRR13Q9NZ81 148 aa5.97□□□□□ -1.45
AC004540.1-206ENST00000448056 FBN1P35555 2871 aaKnown RBP5.96□□□□□ -1.45
AC004540.1-206ENST00000448056 IGHV7-81A0A0B4J1V7 117 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 TRAV3A0A0B4J244 114 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 INMT-MINDY4F8WBC2 141 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 UPK2O00526 184 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 ATG12O94817 140 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 KBTBD11O94819 623 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 DUS4LO95620 317 aaKnown RBP5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 IGKV1-5P01602 117 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 IGHG2P01859 326 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 HLA-AP01891 365 aaKnown RBP5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 IL5P05113 134 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 P0C879 139 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 EGR2P11161 476 aaPredicted RBP5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 SRPXP78539 464 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 DHRS2Q13268 280 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 RGS21Q2M5E4 152 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 KRTAP24-1Q3LI83 254 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 C9orf152Q5JTZ5 239 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 TMEM268Q5VZI3 342 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 H2BFWTQ7Z2G1 175 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 LYG2Q86SG7 212 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 LRTM2Q8N967 370 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 LINC01006Q8NI28 216 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 IL22RA2Q969J5 263 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 HSPB9Q9BQS6 159 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 OR51J1Q9H342 316 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 ZNF430Q9H8G1 570 aaPredicted RBP5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 TMEM140Q9NV12 185 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 MMP24Q9Y5R2 645 aa5.96□□□□□ -1.46
AC004540.1-206ENST00000448056 ATRQ13535 2644 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms