RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 SGMS2Q8NHU3 365 aa9.2□□□□□ -0.94
LINC00408-201ENST00000447784 ABHD5Q8WTS1 349 aa9.2□□□□□ -0.94
LINC00408-201ENST00000447784 CASTOR1Q8WTX7 329 aa9.2□□□□□ -0.94
LINC00408-201ENST00000447784 TMEM230Q96A57 120 aa9.2□□□□□ -0.94
LINC00408-201ENST00000447784 GALNT14Q96FL9 552 aa9.2□□□□□ -0.94
LINC00408-201ENST00000447784 BEX1Q9HBH7 125 aa9.2□□□□□ -0.94
LINC00408-201ENST00000447784 SIGLEC9Q9Y336 463 aa9.2□□□□□ -0.94
LINC00408-201ENST00000447784 SH2D7A6NKC9 451 aaPredicted RBP9.19□□□□□ -0.94
LINC00408-201ENST00000447784 MARCH11A6NNE9 402 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 RBMXL2O75526 392 aaKnown RBP9.19□□□□□ -0.94
LINC00408-201ENST00000447784 TSPAN9O75954 239 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 SFT2D2O95562 160 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 CDS2O95674 445 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 PTTG1O95997 202 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 IGLV2-23P01705 113 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 HLA-DRB1P01911 266 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 AMY1AP04745 511 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 OR4E1P0C645 316 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 G6PCP35575 357 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 VDAC2P45880 294 aaPredicted RBP9.19□□□□□ -0.94
LINC00408-201ENST00000447784 PPP1R1AQ13522 171 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 PRSS8Q16651 343 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 RGS21Q2M5E4 152 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 TMEM268Q5VZI3 342 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 OR4A47Q6IF82 309 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 Q6ZSV7 163 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 MMD2Q8IY49 270 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 DUSP18Q8NEJ0 188 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 COQ8AQ8NI60 647 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 RBPMSQ93062 196 aaKnown RBP9.19□□□□□ -0.94
LINC00408-201ENST00000447784 IL22RA2Q969J5 263 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 ALX4Q9H161 411 aaPredicted RBP9.19□□□□□ -0.94
LINC00408-201ENST00000447784 TMEM140Q9NV12 185 aa9.19□□□□□ -0.94
LINC00408-201ENST00000447784 C9orf170A2RU37 121 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 CLPSL1A2RUU4 121 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 KBTBD11O94819 623 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 DHFRP00374 187 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 CA2P00918 260 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 SUPT4H1P63272 117 aaKnown RBP9.18□□□□□ -0.94
LINC00408-201ENST00000447784 CX3CL1P78423 397 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 TMEM187Q14656 261 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 FXYD3Q14802 87 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 POU2AF1Q16633 256 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 ZNF562Q6V9R5 426 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 LYG2Q86SG7 212 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 OR4A16Q8NH70 328 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 TMEM167AQ8TBQ9 72 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 GLYATL2Q8WU03 294 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 TAF15Q92804 592 aaKnown RBP eCLIP9.18□□□□□ -0.94
LINC00408-201ENST00000447784 TMEM56Q96MV1 263 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 GON7Q9BXV9 100 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 COMMD5Q9GZQ3 224 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 C16orf95Q9H693 158 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 ZNF702PQ9H963 129 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 GPN1Q9HCN4 374 aaPredicted RBP9.18□□□□□ -0.94
LINC00408-201ENST00000447784 PARP11Q9NR21 331 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 BET1LQ9NYM9 111 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 TMEM56-RWDD3S4R434 201 aa9.18□□□□□ -0.94
LINC00408-201ENST00000447784 INMT-MINDY4F8WBC2 141 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 AP4M1O00189 453 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 UPK2O00526 184 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 FCN1O00602 326 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 IGHG2P01859 326 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 CRYGBP07316 175 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 HLA-GP17693 338 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 MAS1LP35410 378 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 RPL8P62917 257 aaKnown RBP9.17□□□□□ -0.94
LINC00408-201ENST00000447784 DHRS2Q13268 280 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 TNXAQ16473 311 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 FAM219AQ8IW50 185 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 SELENOHQ8IZQ5 122 aaKnown RBP9.17□□□□□ -0.94
LINC00408-201ENST00000447784 PUSL1Q8N0Z8 303 aaKnown RBP9.17□□□□□ -0.94
LINC00408-201ENST00000447784 Q8N2B8 174 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 LINC01006Q8NI28 216 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 GRPEL2Q8TAA5 225 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 ARPC1AQ92747 370 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 PHB2Q99623 299 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 OR51J1Q9H342 316 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 ZNF430Q9H8G1 570 aaPredicted RBP9.17□□□□□ -0.94
LINC00408-201ENST00000447784 TPSG1Q9NRR2 321 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 FKBP11Q9NYL4 201 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 PRR13Q9NZ81 148 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 PRNDQ9UKY0 176 aa9.17□□□□□ -0.94
LINC00408-201ENST00000447784 DSCAML1Q8TD84 2053 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 IGHV7-81A0A0B4J1V7 117 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 A0A0B4J2A0 478 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 PRAF2O60831 178 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 DUS4LO95620 317 aaKnown RBP9.16□□□□□ -0.94
LINC00408-201ENST00000447784 IFNA21P01568 189 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 IGKV1-39P01597 117 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 IGKV1D-39P04432 117 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 VDAC1P21796 283 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 TMEM267Q0VDI3 215 aaPredicted RBP9.16□□□□□ -0.94
LINC00408-201ENST00000447784 PJVKQ0ZLH3 352 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 CENPVQ7Z7K6 275 aaPredicted RBP9.16□□□□□ -0.94
LINC00408-201ENST00000447784 CADM3Q8N126 398 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 SLC35G3Q8N808 338 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 ZNF431Q8TF32 576 aaPredicted RBP9.16□□□□□ -0.94
LINC00408-201ENST00000447784 WFDC12Q8WWY7 111 aa9.16□□□□□ -0.94
LINC00408-201ENST00000447784 SEC22AQ96IW7 307 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms