RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 ZNF735P0CB33 412 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 MYOD1P15172 320 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 LPAR6P43657 344 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 RAB25P57735 213 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 DEFA5Q01523 94 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 SPANXN2Q5MJ10 180 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 ASPHD1Q5U4P2 390 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 OR4A47Q6IF82 309 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 CCDC190Q86UF4 302 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 MMD2Q8IY49 270 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 MINDY2Q8NBR6 621 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 DMBX1Q8NFW5 382 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 OR5T1Q8NG75 326 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 OR13C8Q8NGS7 320 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 VSTM2AQ8TAG5 236 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 MARCH1Q8TCQ1 289 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 OR2A7Q96R45 310 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 THAP7Q9BT49 309 aaPredicted RBP9.3□□□□□ -0.92
RFC4-208ENST00000447345 GNB4Q9HAV0 340 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 ZNF355PQ9NSJ1 428 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 ZFP57Q9NU63 452 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 MCUBQ9NWR8 336 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 NOTCH1P46531 2555 aa9.3□□□□□ -0.92
RFC4-208ENST00000447345 TRAV3A0A0B4J244 114 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 ANKRD20A5PA0PJZ0 165 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 MSGN1A6NI15 193 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 NQO2P16083 231 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 F2RP25116 425 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 UCP3P55916 312 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 PIGPP57054 158 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 TPPP2P59282 170 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 TAS2R31P59538 309 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 ERVK-16P61578 105 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 AKIRIN2Q53H80 203 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 ETV3LQ6ZN32 361 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 C1QL4Q86Z23 238 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 PUSL1Q8N0Z8 303 aaKnown RBP9.29□□□□□ -0.92
RFC4-208ENST00000447345 Q8N402 240 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 TCTEX1D1Q8N7M0 179 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 RNF152Q8N8N0 203 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 OR6Q1Q8NGQ2 317 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 TERB2Q8NHR7 220 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 TMEM167AQ8TBQ9 72 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 CD300LFQ8TDQ1 290 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 TRIM63Q969Q1 353 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 MRGPRFQ96AM1 343 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 FYTTD1Q96QD9 318 aaKnown RBP9.29□□□□□ -0.92
RFC4-208ENST00000447345 PLEKHA2Q9HB19 425 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 TMEM140Q9NV12 185 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 COA4Q9NYJ1 87 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 COMMD9Q9P000 198 aa9.29□□□□□ -0.92
RFC4-208ENST00000447345 MARCH11A6NNE9 402 aa9.28□□□□□ -0.92
RFC4-208ENST00000447345 KRASP01116 189 aa9.28□□□□□ -0.92
RFC4-208ENST00000447345 TRGV3P03979 118 aa9.28□□□□□ -0.92
RFC4-208ENST00000447345 CD33P20138 364 aa9.28□□□□□ -0.92
RFC4-208ENST00000447345 CD40LGP29965 261 aa9.28□□□□□ -0.92
RFC4-208ENST00000447345 G6PCP35575 357 aa9.28□□□□□ -0.92
RFC4-208ENST00000447345 RPL27AP46776 148 aaKnown RBP9.28□□□□□ -0.92
RFC4-208ENST00000447345 RAB9AP51151 201 aa9.28□□□□□ -0.92
RFC4-208ENST00000447345 RPL8P62917 257 aaKnown RBP9.28□□□□□ -0.92
RFC4-208ENST00000447345 ZNF585BQ52M93 769 aa9.28□□□□□ -0.92
RFC4-208ENST00000447345 OR51S1Q8NGJ8 323 aa9.28□□□□□ -0.92
RFC4-208ENST00000447345 OR5M8Q8NGP6 311 aa9.28□□□□□ -0.92
RFC4-208ENST00000447345 ALX4Q9H161 411 aaPredicted RBP9.28□□□□□ -0.92
RFC4-208ENST00000447345 BET1LQ9NYM9 111 aa9.28□□□□□ -0.92
RFC4-208ENST00000447345 COPZ2Q9P299 210 aa9.28□□□□□ -0.92
RFC4-208ENST00000447345 HMX3A6NHT5 357 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 IGHV3-11P01762 117 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 HLA-GP17693 338 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 CDX1P47902 265 aaPredicted RBP9.27□□□□□ -0.93
RFC4-208ENST00000447345 C19orf35Q6ZS72 473 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 TOMM5Q8N4H5 51 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 ZNF491Q8N8L2 437 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 CCDC71LQ8N9Z2 235 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 ZFAND1Q8TCF1 268 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 MYOZ3Q8TDC0 251 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 C4orf3Q8WVX3 66 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 ZNF486Q96H40 463 aaPredicted RBP9.27□□□□□ -0.93
RFC4-208ENST00000447345 RAX2Q96IS3 184 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 PRRT1Q99946 306 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 AIFM2Q9BRQ8 373 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 SRRQ9GZT4 340 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 C14orf166Q9Y224 244 aaKnown RBP9.27□□□□□ -0.93
RFC4-208ENST00000447345 VSIG4Q9Y279 399 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 NOTCH3Q9UM47 2321 aa9.27□□□□□ -0.93
RFC4-208ENST00000447345 MEGF8Q7Z7M0 2845 aa9.26□□□□□ -0.93
RFC4-208ENST00000447345 E7EUB6 86 aa9.26□□□□□ -0.93
RFC4-208ENST00000447345 G3V4G9 280 aa9.26□□□□□ -0.93
RFC4-208ENST00000447345 CCL24O00175 119 aa9.26□□□□□ -0.93
RFC4-208ENST00000447345 UPK2O00526 184 aa9.26□□□□□ -0.93
RFC4-208ENST00000447345 PRH1P02810 166 aa9.26□□□□□ -0.93
RFC4-208ENST00000447345 REG1AP05451 166 aa9.26□□□□□ -0.93
RFC4-208ENST00000447345 CTSDP07339 412 aaPredicted RBP9.26□□□□□ -0.93
RFC4-208ENST00000447345 ETV6P41212 452 aa9.26□□□□□ -0.93
RFC4-208ENST00000447345 OR2B8PP59922 312 aa9.26□□□□□ -0.93
RFC4-208ENST00000447345 RND3P61587 244 aa9.26□□□□□ -0.93
RFC4-208ENST00000447345 KLF9Q13886 244 aaPredicted RBP9.26□□□□□ -0.93
RFC4-208ENST00000447345 KIAA0141Q14154 515 aaPredicted RBP9.26□□□□□ -0.93
RFC4-208ENST00000447345 POU2AF1Q16633 256 aa9.26□□□□□ -0.93
RFC4-208ENST00000447345 SP6Q3SY56 376 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms