RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 EBF4Q9BQW3 602 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 CCDC28BQ9BUN5 200 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 RHPN1-AS1Q9BWJ2 59 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 C1QTNF4Q9BXJ3 329 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 TAF9BQ9HBM6 251 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 ARMC1Q9NVT9 282 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 IKZF2Q9UKS7 526 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 TRAPPC2LQ9UL33 140 aa2.17□□□□□ -2.06
PMS1-215ENST00000447232 IGKV3-7A0A075B6H7 116 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 IGHV7-4-1A0A0J9YVY3 117 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 LOC107986453A0A1B0GWG9 222 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 KNCNA6PVL3 124 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 TEX22C9J3V5 150 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 NDUFA4O00483 81 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 OR7C1O76099 320 aaPredicted RBP2.16□□□□□ -2.06
PMS1-215ENST00000447232 CRYGCP07315 174 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 SOX2P48431 317 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 SMIM11AP58511 58 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 TNXAQ16473 311 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 ZSCAN26Q16670 478 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 OR10AC1Q8NH08 325 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 OTULINQ96BN8 352 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 UHRF2Q96PU4 802 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 MS4A6AQ9H2W1 248 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 YTHDF2Q9Y5A9 579 aaKnown RBP2.16□□□□□ -2.06
PMS1-215ENST00000447232 TMEM14AQ9Y6G1 99 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 IGLV11-55A0A075B6I3 123 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 IGKV2D-30A0A075B6S6 120 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 IGHV3OR16-8A0A075B7F1 116 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 ITGB1BP1O14713 200 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 GEMIN2O14893 280 aaKnown RBP2.16□□□□□ -2.06
PMS1-215ENST00000447232 ZNF207O43670 478 aaKnown RBP2.16□□□□□ -2.06
PMS1-215ENST00000447232 IGLV2-8P01709 118 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 MAS1P04201 325 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 FGF9P31371 208 aaPredicted RBP2.16□□□□□ -2.06
PMS1-215ENST00000447232 CAPGP40121 348 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 RBM11P57052 281 aaKnown RBP2.16□□□□□ -2.06
PMS1-215ENST00000447232 PAFAH1B2P68402 229 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 KISS1Q15726 138 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 C10orf55Q5SWW7 151 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 UBE2UQ5VVX9 321 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 ZNF322Q6U7Q0 402 aaPredicted RBP2.16□□□□□ -2.06
PMS1-215ENST00000447232 TEX45Q8NA69 505 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 MNS1Q8NEH6 495 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 ABHD14BQ96IU4 210 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 CXorf58Q96LI9 332 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 HARBI1Q96MB7 349 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 IL1RAPQ9NPH3 570 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 XCL2Q9UBD3 114 aa2.16□□□□□ -2.06
PMS1-215ENST00000447232 A0A087WWL8 130 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 TRAV3A0A0B4J244 114 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 HMX3A6NHT5 357 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 F5H768 121 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 PANO1I0J062 215 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 SC5DO75845 299 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 NPPAP01160 153 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 CD5P06127 495 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 GNB3P16520 340 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 UBE2KP61086 200 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 RPL37AP61513 92 aaKnown RBP2.15□□□□□ -2.06
PMS1-215ENST00000447232 MPV17LQ2QL34 196 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 FAM98BQ52LJ0 330 aaKnown RBP2.15□□□□□ -2.06
PMS1-215ENST00000447232 LRRTM1Q86UE6 522 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 IFT20Q8IY31 132 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 STX19Q8N4C7 294 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 CBR4Q8N4T8 237 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 Q8N814 137 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 TMEM116Q8NCL8 245 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 OR9Q2Q8NGE9 314 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 OR13C9Q8NGT0 318 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 OR10K1Q8NGX5 313 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 CIRBP-AS1Q8TBR5 109 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 FGGYQ96C11 551 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 GRAMD2BQ96HH9 432 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 OR10C1Q96KK4 312 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 CMTM3Q96MX0 182 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 KCTD14Q9BQ13 255 aaPredicted RBP2.15□□□□□ -2.06
PMS1-215ENST00000447232 ELAC2Q9BQ52 826 aaKnown RBP2.15□□□□□ -2.06
PMS1-215ENST00000447232 C20orf24Q9BUV8 137 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 CHAC1Q9BUX1 264 aa2.15□□□□□ -2.06
PMS1-215ENST00000447232 ZNF430Q9H8G1 570 aaPredicted RBP2.15□□□□□ -2.06
PMS1-215ENST00000447232 CCDC182A6NF36 153 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 CA11O75493 328 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 GPX5O75715 221 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 APOA2P02652 100 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 MRPL3P09001 348 aaKnown RBP2.15□□□□□ -2.07
PMS1-215ENST00000447232 UBCP0CG48 685 aaKnown RBP2.15□□□□□ -2.07
PMS1-215ENST00000447232 HIST1H1BP16401 226 aaKnown RBP2.15□□□□□ -2.07
PMS1-215ENST00000447232 PTBP1P26599 531 aaKnown RBP eCLIP2.15□□□□□ -2.074e-17■■■■■ 65.4
PMS1-215ENST00000447232 CXCR4P61073 352 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 ACTR3P61158 418 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 ACTL10Q5JWF8 245 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 IDO2Q6ZQW0 420 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 TCF24Q7RTU0 167 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 CPOQ8IVL8 374 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 OR52N1Q8NH53 320 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 OSR1Q8TAX0 266 aaPredicted RBP2.15□□□□□ -2.07
PMS1-215ENST00000447232 NEK7Q8TDX7 302 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 ACOT12Q8WYK0 555 aa2.15□□□□□ -2.07
PMS1-215ENST00000447232 GALMQ96C23 342 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms