RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 KPTNQ9Y664 436 aa13.86□□□□□ -0.19
LAPTM4B-201ENST00000445593 MRPS11P82912 194 aaKnown RBP13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 RBPJQ06330 500 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 TRAT1Q6PIZ9 186 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 OR10D4PQ8NGN7 298 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 WDR61Q9GZS3 305 aaKnown RBP13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 SLC25A10Q9UBX3 287 aaPredicted RBP13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 DSCAML1Q8TD84 2053 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 YPEL1O60688 119 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 COL8A2P25067 703 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 ERVK-16P61578 105 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 TLE4Q04727 773 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 ZNF726P1Q15940 193 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 ZNF787Q6DD87 383 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 ABHD12Q8N2K0 398 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 OR10P1Q8NGE3 313 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 TAF15Q92804 592 aaKnown RBP eCLIP13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 YPEL2Q96QA6 119 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 MAP1AP78559 2803 aaPredicted RBP13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 PIGBOS1A0A0B4J2F0 54 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 A0A1W2PPE2 198 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 C7orf77A4D0Y5 90 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 OR8U8P0C7N1 319 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 TNFRSF1AP19438 455 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 GATA4P43694 442 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 RPL31P62899 125 aaKnown RBP13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 NEU1Q99519 415 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 TMPRSS5Q9H3S3 457 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 TMEM140Q9NV12 185 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 ELOVL5Q9NYP7 299 aa13.85□□□□□ -0.19
LAPTM4B-201ENST00000445593 TET2Q6N021 2002 aaPredicted RBP13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 RAB29O14966 203 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 IGKV1D-33P01593 117 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 IGKV1-33P01594 117 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 P0C879 139 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 DDTP30046 118 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 TMEM14EPQ6UXP3 125 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 E7EQL1 145 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 CDSNQ15517 529 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 LRRC75BQ2VPJ9 315 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 ZNF788Q6ZQV5 615 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 NUP37Q8NFH4 326 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 RCC1LQ96I51 464 aaKnown RBP13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 SIRT7Q9NRC8 400 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 MSRB2Q9Y3D2 182 aa13.84□□□□□ -0.19
LAPTM4B-201ENST00000445593 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.83□□□□□ -0.19
LAPTM4B-201ENST00000445593 F2RL2O00254 374 aa13.83□□□□□ -0.19
LAPTM4B-201ENST00000445593 S100A2P29034 98 aa13.83□□□□□ -0.19
LAPTM4B-201ENST00000445593 SDSLQ96GA7 329 aa13.83□□□□□ -0.19
LAPTM4B-201ENST00000445593 TANC2Q9HCD6 1990 aa13.83□□□□□ -0.19
LAPTM4B-201ENST00000445593 ARHGAP32A7KAX9 2087 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 CCL21O00585 134 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 PHOX2AO14813 284 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 HPRT1P00492 218 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 WNT2P09544 360 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 NDUFA6P56556 154 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 TMPRSS3P57727 454 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 RAB11AP62491 216 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 GCSAMLQ5JQS6 135 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 ACSM6Q6P461 480 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 A6NNC1 897 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 LY6HO94772 140 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 DHRS7BQ6IAN0 325 aaPredicted RBP13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 LFNGQ8NES3 379 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 PPP1R14DQ9NXH3 145 aa13.83□□□□□ -0.2
LAPTM4B-201ENST00000445593 A0A1W2PPH5 198 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 FCN3O75636 299 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 IGKV1-16P04430 117 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 AARDQ4LEZ3 155 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 ZNF835Q9Y2P0 537 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 ITPR1Q14643 2758 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 NAV3Q8IVL0 2385 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 ZNF727A8MUV8 499 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 UBE2CO00762 179 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 RRHO14718 337 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 ICAM4Q14773 271 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 COMMD1Q8N668 190 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 TCEAL7Q9BRU2 100 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 URGCP-MRPS24S4R325 110 aa13.82□□□□□ -0.2
LAPTM4B-201ENST00000445593 PPIAL4EA0A075B759 164 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 NKX6-3A6NJ46 265 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 FAM90A26D6RGX4 464 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 PPIAL4DF5H284 164 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 SCAF4O95104 1147 aaKnown RBP13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 NPSP0C0P6 89 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 PPIAL4FP0DN26 164 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 FAM222BQ8WU58 562 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 RNASE6Q93091 150 aaKnown RBP13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 IDI2-AS1Q9NZ38 188 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 KIAA1456Q9P272 454 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 PPIAL4AQ9Y536 164 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 MAP1LC3B2A6NCE7 125 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 C3orf36Q3SXR2 165 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 FFAR4Q5NUL3 377 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 REC114Q7Z4M0 266 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 RPP25LQ8N5L8 163 aaKnown RBP13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 CLDND2Q8NHS1 167 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 GATAD1Q8WUU5 269 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 MAP1LC3BQ9GZQ8 125 aa13.81□□□□□ -0.2
LAPTM4B-201ENST00000445593 EGLN1Q9GZT9 426 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms