RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 ZNF355PQ9NSJ1 428 aa10.87□□□□□ -0.67
TREX1-202ENST00000444177 SORL1Q92673 2214 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 CREBL2O60519 120 aaPredicted RBP10.86□□□□□ -0.67
TREX1-202ENST00000444177 RAMP3O60896 148 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 CD74P04233 296 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 HLA-DMAP28067 261 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 RFX2P48378 723 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 CD69Q07108 199 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 EIF4EBP1Q13541 118 aaPredicted RBP10.86□□□□□ -0.67
TREX1-202ENST00000444177 FHL3Q13643 280 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 PRSS8Q16651 343 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 CNPY1Q3B7I2 92 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 RNASE12Q5GAN4 147 aaKnown RBP10.86□□□□□ -0.67
TREX1-202ENST00000444177 MFSD4AQ8N468 514 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 ARRDC1Q8N5I2 433 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 POC5Q8NA72 575 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 OR6F1Q8NGZ6 308 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 MOB3AQ96BX8 217 aa10.86□□□□□ -0.67
TREX1-202ENST00000444177 ZNF2Q9BSG1 426 aaPredicted RBP10.86□□□□□ -0.67
TREX1-202ENST00000444177 ALX4Q9H161 411 aaPredicted RBP10.86□□□□□ -0.67
TREX1-202ENST00000444177 I3L521 148 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 ACTL6BO94805 426 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 IGHV3-11P01762 117 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 TRGV3P03979 118 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 LGALS1P09382 135 aaKnown RBP10.85□□□□□ -0.67
TREX1-202ENST00000444177 APELAP0DMC3 54 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 KIR2DS2P43631 304 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 ZNF616Q08AN1 781 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 CATR1Q13166 79 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 DCTN2Q13561 401 aaKnown RBP10.85□□□□□ -0.67
TREX1-202ENST00000444177 MRGPRG-AS1Q2M3A8 158 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 RNASE10Q5GAN6 216 aaKnown RBP10.85□□□□□ -0.67
TREX1-202ENST00000444177 C9orf66Q5T8R8 295 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 ZNF818PQ6ZRF7 136 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 VKORC1L1Q8N0U8 176 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 OR5T1Q8NG75 326 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 OR1N2Q8NGR9 330 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 DEDD2Q8WXF8 326 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 ZNF430Q9H8G1 570 aaPredicted RBP10.85□□□□□ -0.67
TREX1-202ENST00000444177 PTTG2Q9NZH5 202 aa10.85□□□□□ -0.67
TREX1-202ENST00000444177 SEC14L6B5MCN3 397 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 MPPED1O15442 326 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 CD3DP04234 171 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 IFNA6P05013 189 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 OR8U8P0C7N1 319 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 TSPAN5P62079 268 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 RUNX1Q01196 453 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 ZNF45Q02386 682 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 MEF2DQ14814 521 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 ZNF79Q15937 498 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 ASPHD1Q5U4P2 390 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 AADACL3Q5VUY0 350 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 STEAP1BQ6NZ63 245 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 LPCAT3Q6P1A2 487 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 MMD2Q8IY49 270 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 Q8N402 240 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 OR51H1Q8NH63 302 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 SRSF12Q8WXF0 261 aaKnown RBP10.84□□□□□ -0.67
TREX1-202ENST00000444177 THAP7Q9BT49 309 aaPredicted RBP10.84□□□□□ -0.67
TREX1-202ENST00000444177 FXYD6Q9H0Q3 95 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 SLA2Q9H6Q3 261 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 COA4Q9NYJ1 87 aa10.84□□□□□ -0.67
TREX1-202ENST00000444177 ANKRD20A5PA0PJZ0 165 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 MSGN1A6NI15 193 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 H3BUA1 57 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 KBTBD11O94819 623 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 ECI1P42126 302 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 UCP3P55916 312 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 DEFA5Q01523 94 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 PYDC2Q56P42 97 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 C10orf55Q5SWW7 151 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 SSX9Q7RTT3 188 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 SPAG16Q8N0X2 631 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 GDPD1Q8N9F7 314 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 VSTM2AQ8TAG5 236 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 TRIM63Q969Q1 353 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 TMEM68Q96MH6 324 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 SRRQ9GZT4 340 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 LSM4Q9Y4Z0 139 aaKnown RBP10.83□□□□□ -0.68
TREX1-202ENST00000444177 STAB2Q8WWQ8 2551 aa10.83□□□□□ -0.68
TREX1-202ENST00000444177 IGHV4OR15-8A0A075B7B6 117 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 A0A087WW49 117 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 C13orf42A0A1B0GVH6 325 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 LINC01619G3V211 115 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 OR2A4O95047 310 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 RAB3DO95716 219 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 HRASP01112 189 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 RLN1P04808 185 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 AKAIN1P0CW23 69 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 SLURP1P55000 103 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 BRWD1-AS2P59051 145 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 AP3S2P59780 193 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 LHFPL1Q86WI0 220 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 OR2A7Q96R45 310 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 PRR25Q96S07 402 aa10.82□□□□□ -0.68
TREX1-202ENST00000444177 TINAGL1Q9GZM7 467 aaPredicted RBP10.82□□□□□ -0.68
TREX1-202ENST00000444177 KMT2CQ8NEZ4 4911 aaKnown RBP10.82□□□□□ -0.68
TREX1-202ENST00000444177 M0QYG6 137 aa10.81□□□□□ -0.68
TREX1-202ENST00000444177 OR9G9P0C7N8 305 aa10.81□□□□□ -0.68
TREX1-202ENST00000444177 GNRHRP30968 328 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms