RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 AARDQ4LEZ3 155 aa10.78□□□□□ -0.68
SF1-210ENST00000443908 BRD3OSQ6XYD6 125 aa10.78□□□□□ -0.68
SF1-210ENST00000443908 FOXRED2Q8IWF2 684 aa10.78□□□□□ -0.68
SF1-210ENST00000443908 PUSL1Q8N0Z8 303 aaKnown RBP10.78□□□□□ -0.68
SF1-210ENST00000443908 C3orf56Q8N813 242 aa10.78□□□□□ -0.68
SF1-210ENST00000443908 DMBX1Q8NFW5 382 aa10.78□□□□□ -0.68
SF1-210ENST00000443908 OR4D5Q8NGN0 318 aa10.78□□□□□ -0.68
SF1-210ENST00000443908 OR4A5Q8NH83 315 aa10.78□□□□□ -0.68
SF1-210ENST00000443908 VSTM2AQ8TAG5 236 aa10.78□□□□□ -0.68
SF1-210ENST00000443908 C17orf50Q8WW18 174 aa10.78□□□□□ -0.68
SF1-210ENST00000443908 FYTTD1Q96QD9 318 aaKnown RBP10.78□□□□□ -0.68
SF1-210ENST00000443908 TSNAXQ99598 290 aaKnown RBP10.78□□□□□ -0.68
SF1-210ENST00000443908 CHIAQ9BZP6 476 aa10.78□□□□□ -0.68
SF1-210ENST00000443908 ZFP57Q9NU63 452 aa10.78□□□□□ -0.68
SF1-210ENST00000443908 IGHV3OR16-10A0A075B7F0 116 aa10.77□□□□□ -0.69
SF1-210ENST00000443908 A0A0U1RQK1 487 aa10.77□□□□□ -0.69
SF1-210ENST00000443908 FAM90A26D6RGX4 464 aa10.77□□□□□ -0.69
SF1-210ENST00000443908 MOSP00540 346 aa10.77□□□□□ -0.69
SF1-210ENST00000443908 IGLV2-23P01705 113 aa10.77□□□□□ -0.69
SF1-210ENST00000443908 UBE2KP61086 200 aa10.77□□□□□ -0.69
SF1-210ENST00000443908 RPS16P62249 146 aaKnown RBP10.77□□□□□ -0.69
SF1-210ENST00000443908 FGL1Q08830 312 aa10.77□□□□□ -0.69
SF1-210ENST00000443908 OR4A47Q6IF82 309 aa10.77□□□□□ -0.69
SF1-210ENST00000443908 Q8N6K4 173 aa10.77□□□□□ -0.69
SF1-210ENST00000443908 OR2T10Q8NGZ9 312 aa10.77□□□□□ -0.69
SF1-210ENST00000443908 TMEM140Q9NV12 185 aa10.77□□□□□ -0.69
SF1-210ENST00000443908 CACNG5Q9UF02 275 aa10.77□□□□□ -0.69
SF1-210ENST00000443908 SRRM4A7MD48 611 aaKnown RBP10.76□□□□□ -0.69
SF1-210ENST00000443908 IGKV1D-33P01593 117 aa10.76□□□□□ -0.69
SF1-210ENST00000443908 IGKV1-33P01594 117 aa10.76□□□□□ -0.69
SF1-210ENST00000443908 SNRNP70P08621 437 aaKnown RBP10.76□□□□□ -0.69
SF1-210ENST00000443908 FAM106CPP0CH98 169 aa10.76□□□□□ -0.69
SF1-210ENST00000443908 SAA1P0DJI8 122 aaPredicted RBP10.76□□□□□ -0.69
SF1-210ENST00000443908 SCGB2A2Q13296 93 aa10.76□□□□□ -0.69
SF1-210ENST00000443908 VMA21Q3ZAQ7 101 aa10.76□□□□□ -0.69
SF1-210ENST00000443908 Q6ZRM9 215 aa10.76□□□□□ -0.69
SF1-210ENST00000443908 TEX45Q8NA69 505 aa10.76□□□□□ -0.69
SF1-210ENST00000443908 OR8H1Q8NGG4 311 aa10.76□□□□□ -0.69
SF1-210ENST00000443908 OR2T35Q8NGX2 323 aa10.76□□□□□ -0.69
SF1-210ENST00000443908 TMEM167AQ8TBQ9 72 aa10.76□□□□□ -0.69
SF1-210ENST00000443908 ZNF418Q8TF45 676 aaPredicted RBP10.76□□□□□ -0.69
SF1-210ENST00000443908 PPP1R1CQ8WVI7 109 aa10.76□□□□□ -0.69
SF1-210ENST00000443908 EAF1Q96JC9 268 aaPredicted RBP10.76□□□□□ -0.69
SF1-210ENST00000443908 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.76□□□□□ -0.69
SF1-210ENST00000443908 FAM96BQ9Y3D0 163 aa10.76□□□□□ -0.69
SF1-210ENST00000443908 C15orf61A6NNL5 157 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 G3V3Q6 166 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 KBTBD11O94819 623 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 NDUFA3O95167 84 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 C1QBP02746 253 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 OR9G9P0C7N8 305 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 PET100P0DJ07 73 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 NKX2-1P43699 371 aaPredicted RBP10.75□□□□□ -0.69
SF1-210ENST00000443908 RELBQ01201 579 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 CD300CQ08708 224 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 LRRC75BQ2VPJ9 315 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 PDLIM3Q53GG5 364 aaPredicted RBP10.75□□□□□ -0.69
SF1-210ENST00000443908 SSX9Q7RTT3 188 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 ZNF429Q86V71 674 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 VKORC1L1Q8N0U8 176 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 NPBQ8NG41 125 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 OR1S1Q8NH92 325 aa10.75□□□□□ -0.69
SF1-210ENST00000443908 WDR89Q96FK6 387 aaPredicted RBP10.75□□□□□ -0.69
SF1-210ENST00000443908 FOXA2Q9Y261 457 aaPredicted RBP10.75□□□□□ -0.69
SF1-210ENST00000443908 UPK2O00526 184 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 ST8SIA3O43173 380 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 WIPF1O43516 503 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 SNAPC5O75971 98 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 MPC2O95563 127 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 CRYGBP07316 175 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 PSMB6P28072 239 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 ID3Q02535 119 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 RAB32Q13637 225 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 PSG5Q15238 335 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 IZUMO4Q1ZYL8 232 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 TUSC1Q2TAM9 212 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 OR52E5Q8NH55 327 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 OR4A16Q8NH70 328 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 PRDM13Q9H4Q3 707 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 TMEM14BQ9NUH8 114 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 FKBP11Q9NYL4 201 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 GSKIPQ9P0R6 139 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 HSPB7Q9UBY9 170 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 PRNDQ9UKY0 176 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 ZNF257Q9Y2Q1 563 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 POMT1Q9Y6A1 747 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 WNK2Q9Y3S1 2297 aa10.74□□□□□ -0.69
SF1-210ENST00000443908 TRAV14DV4A0A0A6YYC5 116 aa10.73□□□□□ -0.69
SF1-210ENST00000443908 TRIM77I1YAP6 450 aa10.73□□□□□ -0.69
SF1-210ENST00000443908 RRHO14718 337 aa10.73□□□□□ -0.69
SF1-210ENST00000443908 NBR2O15453 112 aa10.73□□□□□ -0.69
SF1-210ENST00000443908 MBPP02686 304 aaPredicted RBP10.73□□□□□ -0.69
SF1-210ENST00000443908 SLC25A4P12235 298 aa10.73□□□□□ -0.69
SF1-210ENST00000443908 LYL1P12980 280 aa10.73□□□□□ -0.69
SF1-210ENST00000443908 TMEM11P17152 192 aa10.73□□□□□ -0.69
SF1-210ENST00000443908 PAX6P26367 422 aa10.73□□□□□ -0.69
SF1-210ENST00000443908 TNFRSF9Q07011 255 aa10.73□□□□□ -0.69
SF1-210ENST00000443908 HES1Q14469 280 aa10.73□□□□□ -0.69
SF1-210ENST00000443908 ZFP69Q49AA0 526 aa10.73□□□□□ -0.69
SF1-210ENST00000443908 RITA1Q96K30 269 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms