RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 HIST1H2BMQ99879 126 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 POLR2J2Q9GZM3 115 aaKnown RBP8.67□□□□□ -1.02
SYNE2-206ENST00000441438 TVP23BQ9NYZ1 205 aa8.67□□□□□ -1.02
SYNE2-206ENST00000441438 EIF4EBP3O60516 100 aaPredicted RBP8.66□□□□□ -1.02
SYNE2-206ENST00000441438 RAMP1O60894 148 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 CTRLP40313 264 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 EIF3IQ13347 325 aaKnown RBP8.66□□□□□ -1.02
SYNE2-206ENST00000441438 KIR3DS1Q14943 382 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 AMMECR1LQ6DCA0 310 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 CNIH2Q6PI25 160 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 MRPL55Q7Z7F7 128 aaKnown RBP8.66□□□□□ -1.02
SYNE2-206ENST00000441438 TTC9CQ8N5M4 171 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 LGALS1P09382 135 aaKnown RBP8.66□□□□□ -1.02
SYNE2-206ENST00000441438 PTH2RP49190 550 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 CLDN17P56750 224 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 PRDX4Q13162 271 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 PLPP4Q5VZY2 271 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 C12orf73Q69YU5 71 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 OR4C11Q6IEV9 310 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 MED28Q9H204 178 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 CCL26Q9Y258 94 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 SCN8AQ9UQD0 1980 aa8.66□□□□□ -1.02
SYNE2-206ENST00000441438 NUDT14O95848 222 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 CEACAM16Q2WEN9 425 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 TM2D1Q9BX74 207 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 KCNIP1Q9NZI2 227 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 TRAV19A0A0A6YYK7 116 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 FNDC10F2Z333 226 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 CPSF4O95639 269 aaKnown RBP8.65□□□□□ -1.02
SYNE2-206ENST00000441438 OR5AL1P0C617 328 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 FGF6P10767 208 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 KLK2P20151 261 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 FBXW4P57775 412 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 TMEM150AQ86TG1 271 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 OOSP2Q86WS3 158 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 OR51G1Q8NGK1 321 aa8.65□□□□□ -1.02
SYNE2-206ENST00000441438 YTHDF2Q9Y5A9 579 aaKnown RBP8.65□□□□□ -1.02
SYNE2-206ENST00000441438 LIFP15018 202 aa8.65□□□□□ -1.03
SYNE2-206ENST00000441438 SFTPDP35247 375 aa8.65□□□□□ -1.03
SYNE2-206ENST00000441438 TMEM183AQ8IXX5 376 aa8.65□□□□□ -1.03
SYNE2-206ENST00000441438 FGFBP3Q8TAT2 258 aa8.65□□□□□ -1.03
SYNE2-206ENST00000441438 VAMP8Q9BV40 100 aa8.65□□□□□ -1.03
SYNE2-206ENST00000441438 PRSS22Q9GZN4 317 aa8.65□□□□□ -1.03
SYNE2-206ENST00000441438 DOCK9Q9BZ29 2069 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 TRDV1A0A1B0GX56 115 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 IRGMA1A4Y4 181 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 DHRS3O75911 302 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 TFPIP10646 304 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 HEPN1Q6WQI6 88 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 STAC2Q6ZMT1 411 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 Q6ZRG5 221 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 OR11H7Q8NGC8 314 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 GEMIN6Q8WXD5 167 aaKnown RBP8.64□□□□□ -1.03
SYNE2-206ENST00000441438 TM2D2Q9BX73 214 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 WDR61Q9GZS3 305 aaKnown RBP8.64□□□□□ -1.03
SYNE2-206ENST00000441438 NPVFQ9HCQ7 196 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 NOTCH4Q99466 2003 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 CFAP54Q96N23 3096 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 BUB3O43684 328 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 MPGP29372 298 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 ZNF146Q15072 292 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 ZNF141Q15928 474 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 CLEC12BQ2HXU8 276 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 NOXRED1Q6NXP6 359 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 COX18Q8N8Q8 333 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 ZC2HC1AQ96GY0 325 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 YPEL4Q96NS1 127 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 PRR25Q96S07 402 aa8.64□□□□□ -1.03
SYNE2-206ENST00000441438 CUL9Q8IWT3 2517 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 TMED7-TICAM2A0A0A6YYA0 188 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 PRR30Q53SZ7 412 aaPredicted RBP8.63□□□□□ -1.03
SYNE2-206ENST00000441438 ASPHD1Q5U4P2 390 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 CLECL1Q8IZS7 167 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 MAL2Q969L2 176 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 ADAT3Q96EY9 351 aaPredicted RBP8.63□□□□□ -1.03
SYNE2-206ENST00000441438 SDF2Q99470 211 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 FKBP11Q9NYL4 201 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 COMMD9Q9P000 198 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 CNTRLQ7Z7A1 2325 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 C5orf63A6NC05 138 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 CCL16O15467 120 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 SELENOPP49908 381 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 C1QL2Q7Z5L3 287 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 OR52P1PQ8NH57 321 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 OR10D3Q8NH80 312 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 EMC6Q9BV81 110 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 TAS2R8Q9NYW2 309 aa8.63□□□□□ -1.03
SYNE2-206ENST00000441438 M0R129 80 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 WISP2O76076 250 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 SOD1P00441 154 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 GPM6AP51674 278 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 CSRP2Q16527 193 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 TMEM183BQ1AE95 376 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 TEPPQ6URK8 271 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 ACY3Q96HD9 319 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 NRN1Q9NPD7 142 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 EHFQ9NZC4 300 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 P01737 135 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 GPX1P07203 203 aa8.62□□□□□ -1.03
SYNE2-206ENST00000441438 SLC35G6P0C7Q6 338 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms