RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 FAM90A26D6RGX4 464 aa15.4■□□□□ 0.06
SNX17-203ENST00000440760 SLC25A16P16260 332 aa15.4■□□□□ 0.06
SNX17-203ENST00000440760 RAB13P51153 203 aa15.4■□□□□ 0.06
SNX17-203ENST00000440760 RPS16P62249 146 aaKnown RBP15.4■□□□□ 0.06
SNX17-203ENST00000440760 SLC51BQ86UW2 128 aa15.4■□□□□ 0.06
SNX17-203ENST00000440760 OSR1Q8TAX0 266 aaPredicted RBP15.4■□□□□ 0.06
SNX17-203ENST00000440760 CYTL1Q9NRR1 136 aa15.4■□□□□ 0.06
SNX17-203ENST00000440760 A0A096LNT2 108 aa15.39■□□□□ 0.05
SNX17-203ENST00000440760 FAM90A9PA6NNJ1 464 aa15.39■□□□□ 0.05
SNX17-203ENST00000440760 C15orf61A6NNL5 157 aa15.39■□□□□ 0.05
SNX17-203ENST00000440760 LEUTXA8MZ59 168 aa15.39■□□□□ 0.05
SNX17-203ENST00000440760 CST7O76096 145 aa15.39■□□□□ 0.05
SNX17-203ENST00000440760 ALKAL2Q6UX46 152 aa15.39■□□□□ 0.05
SNX17-203ENST00000440760 TMEM252Q8N6L7 170 aa15.39■□□□□ 0.05
SNX17-203ENST00000440760 OR4C13Q8NGP0 309 aa15.39■□□□□ 0.05
SNX17-203ENST00000440760 ST8SIA2Q92186 375 aa15.39■□□□□ 0.05
SNX17-203ENST00000440760 RAB40CQ96S21 281 aa15.39■□□□□ 0.05
SNX17-203ENST00000440760 MS4A7Q9GZW8 240 aaPredicted RBP15.39■□□□□ 0.05
SNX17-203ENST00000440760 TIMM23O14925 209 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 IFNA17P01571 189 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 Q5PR19 223 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 DYNAPQ8N1N2 210 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 PSENENQ9NZ42 101 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.38■□□□□ 0.053e-8■■■■□ 26.1
SNX17-203ENST00000440760 CEBPZOSA8MTT3 80 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 IGLV2-23P01705 113 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 CNTFRP26992 372 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 MC5RP33032 325 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 HTR2BP41595 481 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 SSX2Q16385 188 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 RPL7L1Q6DKI1 246 aaKnown RBP15.38■□□□□ 0.05
SNX17-203ENST00000440760 TMEM217Q8N7C4 229 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 DTD1Q8TEA8 209 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 PCNPQ8WW12 178 aaKnown RBP15.38■□□□□ 0.05
SNX17-203ENST00000440760 TPSG1Q9NRR2 321 aa15.38■□□□□ 0.05
SNX17-203ENST00000440760 IGHV3OR16-10A0A075B7F0 116 aa15.37■□□□□ 0.05
SNX17-203ENST00000440760 TXNL1O43396 289 aa15.37■□□□□ 0.05
SNX17-203ENST00000440760 MSMBP08118 114 aa15.37■□□□□ 0.05
SNX17-203ENST00000440760 RPL23AP62750 156 aaKnown RBP15.37■□□□□ 0.05
SNX17-203ENST00000440760 UBA52P62987 128 aaKnown RBP15.37■□□□□ 0.05
SNX17-203ENST00000440760 AARDQ4LEZ3 155 aa15.37■□□□□ 0.05
SNX17-203ENST00000440760 FBLN7Q53RD9 439 aa15.37■□□□□ 0.05
SNX17-203ENST00000440760 GPR157Q5UAW9 335 aa15.37■□□□□ 0.05
SNX17-203ENST00000440760 PUSL1Q8N0Z8 303 aaKnown RBP15.37■□□□□ 0.05
SNX17-203ENST00000440760 WFDC1Q9HC57 220 aa15.37■□□□□ 0.05
SNX17-203ENST00000440760 NUP50Q9UKX7 468 aa15.37■□□□□ 0.05
SNX17-203ENST00000440760 WSB1Q9Y6I7 421 aa15.37■□□□□ 0.05
SNX17-203ENST00000440760 UNC79Q9P2D8 2635 aa15.37■□□□□ 0.05
SNX17-203ENST00000440760 UPK2O00526 184 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 SLC25A17O43808 307 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 OPN1MWP04001 364 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 OPN1MW2P0DN77 364 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 OPN1MW3P0DN78 364 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 CD24P25063 80 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 CEACAM3P40198 252 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 PAX8Q06710 450 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 CLINT1Q14677 625 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 SPANXN5Q5MJ07 72 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 TMEM14BQ9NUH8 114 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 CR1P17927 2039 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 HECTD1Q9ULT8 2610 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 RNF223E7ERA6 249 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 KBTBD11O94819 623 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 IL6RP08887 468 aaPredicted RBP15.36■□□□□ 0.05
SNX17-203ENST00000440760 METTL15P1P0C7V9 234 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 OR4C12Q96R67 309 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 BET1LQ9NYM9 111 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 TCF19Q9Y242 345 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 FOXA2Q9Y261 457 aaPredicted RBP15.36■□□□□ 0.05
SNX17-203ENST00000440760 ZANQ9Y493 2812 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 ZFHX3Q15911 3703 aa15.36■□□□□ 0.05
SNX17-203ENST00000440760 PLXNB1O43157 2135 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 MED6O75586 246 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 UBE2E1P51965 193 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 LGALS4P56470 323 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 CFHR4Q92496 578 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 SMIM8Q96KF7 97 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 SLC25A31Q9H0C2 315 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 SAA4P35542 130 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 DYNLT3P51808 116 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 ARHGDIBP52566 201 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 RUSC1-AS1Q66K80 236 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 ZNF429Q86V71 674 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 KRTAP1-3Q8IUG1 177 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 LRRC75A-AS1Q8N1F1 130 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 HINT2Q9BX68 163 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 UBQLN2Q9UHD9 624 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 OR51B2Q9Y5P1 312 aa15.35■□□□□ 0.05
SNX17-203ENST00000440760 TRAV40A0A0B4J280 105 aa15.34■□□□□ 0.05
SNX17-203ENST00000440760 CENPVL3A0A0U1RRI6 287 aa15.34■□□□□ 0.05
SNX17-203ENST00000440760 VENTXO95231 258 aa15.34■□□□□ 0.05
SNX17-203ENST00000440760 IFNA7P01567 189 aa15.34■□□□□ 0.05
SNX17-203ENST00000440760 SPCS3P61009 180 aa15.34■□□□□ 0.05
SNX17-203ENST00000440760 FAM74A1Q5RGS3 127 aa15.34■□□□□ 0.05
SNX17-203ENST00000440760 HAPLN4Q86UW8 402 aa15.34■□□□□ 0.05
SNX17-203ENST00000440760 OR5C1Q8NGR4 320 aa15.34■□□□□ 0.05
SNX17-203ENST00000440760 CCDC168Q8NDH2 2452 aa15.33■□□□□ 0.05
SNX17-203ENST00000440760 HOXA1P49639 335 aaPredicted RBP15.33■□□□□ 0.05
SNX17-203ENST00000440760 ARL16Q0P5N6 197 aa15.33■□□□□ 0.05
SNX17-203ENST00000440760 STX12Q86Y82 276 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms