RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 DYRK1AQ13627 763 aa15.24■□□□□ 0.03
SHROOM1-204ENST00000440118 MSMO1Q15800 293 aa15.24■□□□□ 0.03
SHROOM1-204ENST00000440118 FAM223AQ8IWN6 122 aa15.24■□□□□ 0.03
SHROOM1-204ENST00000440118 ZBTB34Q8NCN2 500 aa15.24■□□□□ 0.03
SHROOM1-204ENST00000440118 SNAPC3Q92966 411 aa15.24■□□□□ 0.03
SHROOM1-204ENST00000440118 AIFM2Q9BRQ8 373 aa15.24■□□□□ 0.03
SHROOM1-204ENST00000440118 HRASLSQ9HDD0 168 aa15.24■□□□□ 0.03
SHROOM1-204ENST00000440118 U3KQK5 164 aa15.24■□□□□ 0.03
SHROOM1-204ENST00000440118 RPL27AP46776 148 aaKnown RBP15.23■□□□□ 0.03
SHROOM1-204ENST00000440118 TAS2R20P59543 309 aa15.23■□□□□ 0.03
SHROOM1-204ENST00000440118 ZNF343Q6P1L6 599 aa15.23■□□□□ 0.03
SHROOM1-204ENST00000440118 SPAG16Q8N0X2 631 aa15.23■□□□□ 0.03
SHROOM1-204ENST00000440118 OR9G4Q8NGQ1 327 aa15.23■□□□□ 0.03
SHROOM1-204ENST00000440118 BORCS5Q969J3 196 aa15.23■□□□□ 0.03
SHROOM1-204ENST00000440118 WWC2-AS2Q96NR7 200 aa15.23■□□□□ 0.03
SHROOM1-204ENST00000440118 TSC22D3Q99576 134 aa15.23■□□□□ 0.03
SHROOM1-204ENST00000440118 AKIP1Q9NQ31 210 aa15.23■□□□□ 0.03
SHROOM1-204ENST00000440118 HMX3A6NHT5 357 aa15.22■□□□□ 0.03
SHROOM1-204ENST00000440118 SULT1C2O00338 296 aa15.22■□□□□ 0.03
SHROOM1-204ENST00000440118 TRBV12-3P01733 135 aa15.22■□□□□ 0.03
SHROOM1-204ENST00000440118 MAS1LP35410 378 aa15.22■□□□□ 0.03
SHROOM1-204ENST00000440118 TAS2R46P59540 309 aa15.22■□□□□ 0.03
SHROOM1-204ENST00000440118 EIF4EBP1Q13541 118 aaPredicted RBP15.22■□□□□ 0.03
SHROOM1-204ENST00000440118 AADACL3Q5VUY0 350 aa15.22■□□□□ 0.03
SHROOM1-204ENST00000440118 OR5H2Q8NGV7 314 aa15.22■□□□□ 0.03
SHROOM1-204ENST00000440118 OR51H1Q8NH63 302 aa15.22■□□□□ 0.03
SHROOM1-204ENST00000440118 TMEM167AQ8TBQ9 72 aa15.22■□□□□ 0.03
SHROOM1-204ENST00000440118 ZNF257Q9Y2Q1 563 aa15.22■□□□□ 0.03
SHROOM1-204ENST00000440118 DNAH9Q9NYC9 4486 aa15.22■□□□□ 0.03
SHROOM1-204ENST00000440118 OR2J3O76001 311 aa15.21■□□□□ 0.03
SHROOM1-204ENST00000440118 DHFRP00374 187 aa15.21■□□□□ 0.03
SHROOM1-204ENST00000440118 RPL8P62917 257 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-204ENST00000440118 TTC9CQ8N5M4 171 aa15.21■□□□□ 0.03
SHROOM1-204ENST00000440118 NECAP1Q8NC96 275 aa15.21■□□□□ 0.03
SHROOM1-204ENST00000440118 SLC25A46Q96AG3 418 aa15.21■□□□□ 0.03
SHROOM1-204ENST00000440118 KCTD12Q96CX2 325 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-204ENST00000440118 BCL7BQ9BQE9 202 aa15.21■□□□□ 0.03
SHROOM1-204ENST00000440118 COMMD3Q9UBI1 195 aa15.21■□□□□ 0.03
SHROOM1-204ENST00000440118 RSL24D1Q9UHA3 163 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-204ENST00000440118 PRSS3P35030 304 aa15.2■□□□□ 0.02
SHROOM1-204ENST00000440118 NCS1P62166 190 aa15.2■□□□□ 0.02
SHROOM1-204ENST00000440118 KLF5Q13887 457 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-204ENST00000440118 C15orf32Q32M92 178 aa15.2■□□□□ 0.02
SHROOM1-204ENST00000440118 PUSL1Q8N0Z8 303 aaKnown RBP15.2■□□□□ 0.02
SHROOM1-204ENST00000440118 DMBX1Q8NFW5 382 aa15.2■□□□□ 0.02
SHROOM1-204ENST00000440118 GIMAP1Q8WWP7 306 aa15.2■□□□□ 0.02
SHROOM1-204ENST00000440118 FUNDC2Q9BWH2 189 aa15.2■□□□□ 0.02
SHROOM1-204ENST00000440118 PEMTQ9UBM1 199 aa15.2■□□□□ 0.02
SHROOM1-204ENST00000440118 RBFOX2O43251 390 aaKnown RBP eCLIP15.19■□□□□ 0.027e-7■■■■□ 20.2
SHROOM1-204ENST00000440118 IGLV1-51P01701 117 aa15.19■□□□□ 0.02
SHROOM1-204ENST00000440118 PMP2P02689 132 aa15.19■□□□□ 0.02
SHROOM1-204ENST00000440118 DEFA4P12838 97 aa15.19■□□□□ 0.02
SHROOM1-204ENST00000440118 HLA-GP17693 338 aa15.19■□□□□ 0.02
SHROOM1-204ENST00000440118 TAS2R31P59538 309 aa15.19■□□□□ 0.02
SHROOM1-204ENST00000440118 ZNF45Q02386 682 aa15.19■□□□□ 0.02
SHROOM1-204ENST00000440118 FAM209BQ5JX69 171 aa15.19■□□□□ 0.02
SHROOM1-204ENST00000440118 OR4A47Q6IF82 309 aa15.19■□□□□ 0.02
SHROOM1-204ENST00000440118 ZNF818PQ6ZRF7 136 aa15.19■□□□□ 0.02
SHROOM1-204ENST00000440118 OR4A5Q8NH83 315 aa15.19■□□□□ 0.02
SHROOM1-204ENST00000440118 CD300LFQ8TDQ1 290 aa15.19■□□□□ 0.02
SHROOM1-204ENST00000440118 ZNF2Q9BSG1 426 aaPredicted RBP15.19■□□□□ 0.02
SHROOM1-204ENST00000440118 TENM3Q9P273 2699 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 H0Y980 276 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 RBMXL2O75526 392 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 HPRT1P00492 218 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 EIF4EP06730 217 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 NQO2P16083 231 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 TMBIM6P55061 237 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 BRWD1-AS2P59051 145 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 ERVK-16P61578 105 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 VBP1P61758 197 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 SGPP2Q8IWX5 399 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 BET1LQ9NYM9 111 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 PTTG2Q9NZH5 202 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 FBXL7Q9UJT9 491 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 ADAM30Q9UKF2 790 aa15.18■□□□□ 0.02
SHROOM1-204ENST00000440118 NBEAL2Q6ZNJ1 2754 aa15.17■□□□□ 0.02
SHROOM1-204ENST00000440118 TRBV9A0A0B4J1U6 114 aa15.17■□□□□ 0.02
SHROOM1-204ENST00000440118 NPIPB5A8MRT5 1133 aa15.17■□□□□ 0.02
SHROOM1-204ENST00000440118 TEX22C9J3V5 150 aa15.17■□□□□ 0.02
SHROOM1-204ENST00000440118 RLN1P04808 185 aa15.17■□□□□ 0.02
SHROOM1-204ENST00000440118 FRMD6-AS1P0C7T7 363 aa15.17■□□□□ 0.02
SHROOM1-204ENST00000440118 RFX2P48378 723 aa15.17■□□□□ 0.02
SHROOM1-204ENST00000440118 LCN12Q6JVE5 192 aa15.17■□□□□ 0.02
SHROOM1-204ENST00000440118 CMTM1Q8IZ96 169 aa15.17■□□□□ 0.02
SHROOM1-204ENST00000440118 COMMD5Q9GZQ3 224 aa15.17■□□□□ 0.02
SHROOM1-204ENST00000440118 SLC2A9Q9NRM0 540 aa15.17■□□□□ 0.02
SHROOM1-204ENST00000440118 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 IL6RP08887 468 aaPredicted RBP15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 ZNF735P0CB33 412 aa15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 AREGP15514 252 aa15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 HLA-DMAP28067 261 aa15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 S100GP29377 79 aa15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 C19orf35Q6ZS72 473 aa15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 GTSCR1Q86UQ5 136 aa15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 SNX29P2Q8IUI4 249 aa15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 OR6F1Q8NGZ6 308 aa15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 DYNLRB2Q8TF09 96 aa15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 RAB2BQ8WUD1 216 aa15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 MOB3AQ96BX8 217 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms