RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 NDUFA7O95182 113 aa14.61□□□□□ -0.07
HDAC6-208ENST00000438518 IL6RP08887 468 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-208ENST00000438518 VDAC1P21796 283 aa14.61□□□□□ -0.07
HDAC6-208ENST00000438518 G6PCP35575 357 aa14.61□□□□□ -0.07
HDAC6-208ENST00000438518 OXA1LQ15070 435 aa14.61□□□□□ -0.07
HDAC6-208ENST00000438518 TMEM268Q5VZI3 342 aa14.61□□□□□ -0.07
HDAC6-208ENST00000438518 H2BFWTQ7Z2G1 175 aa14.61□□□□□ -0.07
HDAC6-208ENST00000438518 SELENOHQ8IZQ5 122 aaKnown RBP14.61□□□□□ -0.07
HDAC6-208ENST00000438518 Q8N2B8 174 aa14.61□□□□□ -0.07
HDAC6-208ENST00000438518 ZNF431Q8TF32 576 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-208ENST00000438518 MITD1Q8WV92 249 aa14.61□□□□□ -0.07
HDAC6-208ENST00000438518 CACFD1Q9UGQ2 172 aa14.61□□□□□ -0.07
HDAC6-208ENST00000438518 TMED3Q9Y3Q3 217 aa14.61□□□□□ -0.07
HDAC6-208ENST00000438518 MMP24Q9Y5R2 645 aa14.61□□□□□ -0.07
HDAC6-208ENST00000438518 SNRPGP15A8MWD9 76 aa14.6□□□□□ -0.07
HDAC6-208ENST00000438518 ACTL6BO94805 426 aa14.6□□□□□ -0.07
HDAC6-208ENST00000438518 IGHG2P01859 326 aa14.6□□□□□ -0.07
HDAC6-208ENST00000438518 ZNF562Q6V9R5 426 aa14.6□□□□□ -0.07
HDAC6-208ENST00000438518 SSX9Q7RTT3 188 aa14.6□□□□□ -0.07
HDAC6-208ENST00000438518 VKORC1L1Q8N0U8 176 aa14.6□□□□□ -0.07
HDAC6-208ENST00000438518 RNASE11Q8TAA1 199 aaKnown RBP14.6□□□□□ -0.07
HDAC6-208ENST00000438518 LHFPL5Q8TAF8 219 aa14.6□□□□□ -0.07
HDAC6-208ENST00000438518 CASTOR1Q8WTX7 329 aa14.6□□□□□ -0.07
HDAC6-208ENST00000438518 FKBP11Q9NYL4 201 aa14.6□□□□□ -0.07
HDAC6-208ENST00000438518 ZNF580Q9UK33 172 aa14.6□□□□□ -0.07
HDAC6-208ENST00000438518 NIPBLQ6KC79 2804 aaeCLIP14.59□□□□□ -0.07
HDAC6-208ENST00000438518 UPK2O00526 184 aa14.59□□□□□ -0.07
HDAC6-208ENST00000438518 SNAPC5O75971 98 aa14.59□□□□□ -0.07
HDAC6-208ENST00000438518 BLCAPP62952 87 aa14.59□□□□□ -0.07
HDAC6-208ENST00000438518 PRSS8Q16651 343 aa14.59□□□□□ -0.07
HDAC6-208ENST00000438518 FOXRED2Q8IWF2 684 aa14.59□□□□□ -0.07
HDAC6-208ENST00000438518 SLC35G3Q8N808 338 aa14.59□□□□□ -0.07
HDAC6-208ENST00000438518 OR2T6Q8NHC8 308 aa14.59□□□□□ -0.07
HDAC6-208ENST00000438518 CHPT1Q8WUD6 406 aa14.59□□□□□ -0.07
HDAC6-208ENST00000438518 RBMXL1Q96E39 390 aaKnown RBP14.59□□□□□ -0.07
HDAC6-208ENST00000438518 C16orf95Q9H693 158 aa14.59□□□□□ -0.07
HDAC6-208ENST00000438518 BEX1Q9HBH7 125 aa14.59□□□□□ -0.07
HDAC6-208ENST00000438518 PRNDQ9UKY0 176 aa14.59□□□□□ -0.07
HDAC6-208ENST00000438518 A0A1B0GUS0 222 aa14.58□□□□□ -0.08
HDAC6-208ENST00000438518 CA2P00918 260 aa14.58□□□□□ -0.08
HDAC6-208ENST00000438518 IGKV1-5P01602 117 aa14.58□□□□□ -0.08
HDAC6-208ENST00000438518 P0C879 139 aa14.58□□□□□ -0.08
HDAC6-208ENST00000438518 HKR1P10072 659 aa14.58□□□□□ -0.08
HDAC6-208ENST00000438518 RPL8P62917 257 aaKnown RBP14.58□□□□□ -0.08
HDAC6-208ENST00000438518 ANKRD55Q3KP44 614 aa14.58□□□□□ -0.08
HDAC6-208ENST00000438518 Q6ZSV7 163 aa14.58□□□□□ -0.08
HDAC6-208ENST00000438518 SLC35E3Q7Z769 313 aa14.58□□□□□ -0.08
HDAC6-208ENST00000438518 OR4F5Q8NH21 305 aa14.58□□□□□ -0.08
HDAC6-208ENST00000438518 ZNF430Q9H8G1 570 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-208ENST00000438518 ZNF702PQ9H963 129 aa14.58□□□□□ -0.08
HDAC6-208ENST00000438518 IGHV7-81A0A0B4J1V7 117 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 SLC25A6P12236 298 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 SPNP16150 400 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 ARSJQ5FYB0 599 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-208ENST00000438518 C9orf152Q5JTZ5 239 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 THOC7Q6I9Y2 204 aaKnown RBP14.57□□□□□ -0.08
HDAC6-208ENST00000438518 ZNF429Q86V71 674 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 PRIMA1Q86XR5 153 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 OR4A16Q8NH70 328 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 SPIN2AQ99865 258 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 SPIN2BQ9BPZ2 258 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 GON7Q9BXV9 100 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 OR51J1Q9H342 316 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 TPSG1Q9NRR2 321 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 COA4Q9NYJ1 87 aa14.57□□□□□ -0.08
HDAC6-208ENST00000438518 C7orf66A4D0T2 115 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 C15orf61A6NNL5 157 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 AP4M1O00189 453 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 IFNA21P01568 189 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 IGF1P05019 195 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 HLA-GP17693 338 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 RIPPLY3P57055 190 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 CX3CL1P78423 397 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 MRGPRG-AS1Q2M3A8 158 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 NMSQ5H8A3 153 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 C12orf45Q8N5I9 185 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-208ENST00000438518 OR52B4Q8NGK2 314 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 OR5B3Q8NH48 314 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 ARPC1AQ92747 370 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 TMEM68Q96MH6 324 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 SEC22CQ9BRL7 303 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 COMMD5Q9GZQ3 224 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 FOXA2Q9Y261 457 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-208ENST00000438518 ZNF257Q9Y2Q1 563 aa14.56□□□□□ -0.08
HDAC6-208ENST00000438518 DBX1A6NMT0 343 aa14.55□□□□□ -0.08
HDAC6-208ENST00000438518 FCN1O00602 326 aa14.55□□□□□ -0.08
HDAC6-208ENST00000438518 CNIH1O95406 144 aa14.55□□□□□ -0.08
HDAC6-208ENST00000438518 OR9G9P0C7N8 305 aa14.55□□□□□ -0.08
HDAC6-208ENST00000438518 COMPP49747 757 aaPredicted RBP14.55□□□□□ -0.08
HDAC6-208ENST00000438518 CRIP2P52943 208 aaPredicted RBP14.55□□□□□ -0.08
HDAC6-208ENST00000438518 RELBQ01201 579 aa14.55□□□□□ -0.08
HDAC6-208ENST00000438518 FXYD3Q14802 87 aa14.55□□□□□ -0.08
HDAC6-208ENST00000438518 TNXAQ16473 311 aa14.55□□□□□ -0.08
HDAC6-208ENST00000438518 TATDN3Q17R31 274 aa14.55□□□□□ -0.08
HDAC6-208ENST00000438518 LYZL2Q7Z4W2 148 aa14.55□□□□□ -0.08
HDAC6-208ENST00000438518 CLCC1Q96S66 551 aa14.55□□□□□ -0.08
HDAC6-208ENST00000438518 HSPB9Q9BQS6 159 aa14.55□□□□□ -0.08
HDAC6-208ENST00000438518 SRSF8Q9BRL6 282 aaKnown RBP14.55□□□□□ -0.08
HDAC6-208ENST00000438518 TMEM14BQ9NUH8 114 aa14.55□□□□□ -0.08
HDAC6-208ENST00000438518 PRR13Q9NZ81 148 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms