RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 DNASE2O00115 360 aaPredicted RBP21■□□□□ 0.95
CPNE1-216ENST00000437340 IL6RP08887 468 aaPredicted RBP21■□□□□ 0.95
CPNE1-216ENST00000437340 PPT1P50897 306 aa21■□□□□ 0.95
CPNE1-216ENST00000437340 SFT2D1Q8WV19 159 aa21■□□□□ 0.95
CPNE1-216ENST00000437340 RPRMQ9NS64 109 aa21■□□□□ 0.95
CPNE1-216ENST00000437340 TCF19Q9Y242 345 aa21■□□□□ 0.95
CPNE1-216ENST00000437340 YLPM1P49750 1951 aaKnown RBP20.99■□□□□ 0.95
CPNE1-216ENST00000437340 IGHV2-70P01814 119 aa20.99■□□□□ 0.95
CPNE1-216ENST00000437340 CCL20P78556 96 aa20.99■□□□□ 0.95
CPNE1-216ENST00000437340 TMEM41BQ5BJD5 291 aa20.99■□□□□ 0.95
CPNE1-216ENST00000437340 OR13D1Q8NGV5 346 aa20.99■□□□□ 0.95
CPNE1-216ENST00000437340 TMEM186Q96B77 213 aa20.99■□□□□ 0.95
CPNE1-216ENST00000437340 RAB1BQ9H0U4 201 aa20.99■□□□□ 0.95
CPNE1-216ENST00000437340 HEYLQ9NQ87 328 aaPredicted RBP20.99■□□□□ 0.95
CPNE1-216ENST00000437340 CBLN4Q9NTU7 201 aa20.99■□□□□ 0.95
CPNE1-216ENST00000437340 RALYQ9UKM9 306 aaKnown RBP20.99■□□□□ 0.95
CPNE1-216ENST00000437340 KMT2BQ9UMN6 2715 aaPredicted RBP20.98■□□□□ 0.95
CPNE1-216ENST00000437340 J3QR06 171 aa20.98■□□□□ 0.95
CPNE1-216ENST00000437340 HSPE1P61604 102 aaKnown RBP20.98■□□□□ 0.95
CPNE1-216ENST00000437340 MBD3L1Q8WWY6 194 aa20.98■□□□□ 0.95
CPNE1-216ENST00000437340 SLC35B3Q9H1N7 401 aa20.98■□□□□ 0.95
CPNE1-216ENST00000437340 ZNRD1Q9P1U0 126 aa20.98■□□□□ 0.95
CPNE1-216ENST00000437340 A0A1B0GV50 99 aa20.97■□□□□ 0.95
CPNE1-216ENST00000437340 RBFOX3A6NFN3 312 aa20.97■□□□□ 0.95
CPNE1-216ENST00000437340 APOA2P02652 100 aa20.97■□□□□ 0.95
CPNE1-216ENST00000437340 MDKP21741 143 aaPredicted RBP20.97■□□□□ 0.95
CPNE1-216ENST00000437340 GGACTQ9BVM4 153 aa20.97■□□□□ 0.95
CPNE1-216ENST00000437340 PRNDQ9UKY0 176 aa20.97■□□□□ 0.95
CPNE1-216ENST00000437340 IFNA10P01566 189 aa20.97■□□□□ 0.95
CPNE1-216ENST00000437340 ZNF137PP52743 207 aa20.97■□□□□ 0.95
CPNE1-216ENST00000437340 OR5AN1Q8NGI8 311 aa20.97■□□□□ 0.95
CPNE1-216ENST00000437340 OR10X1Q8NGY0 326 aa20.97■□□□□ 0.95
CPNE1-216ENST00000437340 OR9G1Q8NH87 305 aa20.97■□□□□ 0.95
CPNE1-216ENST00000437340 OSR1Q8TAX0 266 aaPredicted RBP20.97■□□□□ 0.95
CPNE1-216ENST00000437340 DOCK11Q5JSL3 2073 aa20.96■□□□□ 0.95
CPNE1-216ENST00000437340 LYNX1G3V0Z9 82 aa20.96■□□□□ 0.95
CPNE1-216ENST00000437340 IGHV1-8P0DP01 117 aa20.96■□□□□ 0.95
CPNE1-216ENST00000437340 LYNX1P0DP58 116 aa20.96■□□□□ 0.95
CPNE1-216ENST00000437340 MRPL20Q9BYC9 149 aaKnown RBP20.96■□□□□ 0.95
CPNE1-216ENST00000437340 ZNF257Q9Y2Q1 563 aa20.96■□□□□ 0.95
CPNE1-216ENST00000437340 MBP02144 154 aa20.95■□□□□ 0.94
CPNE1-216ENST00000437340 IGKV1-16P04430 117 aa20.95■□□□□ 0.94
CPNE1-216ENST00000437340 FGF7P21781 194 aa20.95■□□□□ 0.94
CPNE1-216ENST00000437340 HOXA1P49639 335 aaPredicted RBP20.95■□□□□ 0.94
CPNE1-216ENST00000437340 ZNF841Q6ZN19 808 aa20.95■□□□□ 0.94
CPNE1-216ENST00000437340 VSIRQ9H7M9 311 aa20.95■□□□□ 0.94
CPNE1-216ENST00000437340 BET1LQ9NYM9 111 aa20.95■□□□□ 0.94
CPNE1-216ENST00000437340 H0YJW9 148 aa20.95■□□□□ 0.94
CPNE1-216ENST00000437340 UPK2O00526 184 aa20.95■□□□□ 0.94
CPNE1-216ENST00000437340 F12P00748 615 aaPredicted RBP20.95■□□□□ 0.94
CPNE1-216ENST00000437340 C11orf71Q6IPW1 123 aa20.95■□□□□ 0.94
CPNE1-216ENST00000437340 C11orf42Q8N5U0 333 aa20.95■□□□□ 0.94
CPNE1-216ENST00000437340 ZNF462Q96JM2 2506 aa20.94■□□□□ 0.94
CPNE1-216ENST00000437340 FAM74A7A6NL05 159 aa20.94■□□□□ 0.94
CPNE1-216ENST00000437340 RAB11AP62491 216 aa20.94■□□□□ 0.94
CPNE1-216ENST00000437340 FAM74A3Q4VXF1 159 aa20.94■□□□□ 0.94
CPNE1-216ENST00000437340 ETV3LQ6ZN32 361 aa20.94■□□□□ 0.94
CPNE1-216ENST00000437340 TNFRSF14Q92956 283 aa20.94■□□□□ 0.94
CPNE1-216ENST00000437340 ST6GALNAC6Q969X2 333 aa20.94■□□□□ 0.94
CPNE1-216ENST00000437340 A0A1W2PPH5 198 aa20.93■□□□□ 0.94
CPNE1-216ENST00000437340 TSPAN4O14817 238 aa20.93■□□□□ 0.94
CPNE1-216ENST00000437340 SOX15O60248 233 aa20.93■□□□□ 0.94
CPNE1-216ENST00000437340 NPBWR1P48145 328 aa20.93■□□□□ 0.94
CPNE1-216ENST00000437340 TMEM177Q53S58 311 aa20.93■□□□□ 0.94
CPNE1-216ENST00000437340 ZNF506Q5JVG8 444 aa20.93■□□□□ 0.94
CPNE1-216ENST00000437340 CLRN3Q8NCR9 226 aa20.93■□□□□ 0.94
CPNE1-216ENST00000437340 CLDND2Q8NHS1 167 aa20.93■□□□□ 0.94
CPNE1-216ENST00000437340 NEU4Q8WWR8 484 aaPredicted RBP20.93■□□□□ 0.94
CPNE1-216ENST00000437340 RCC1LQ96I51 464 aaKnown RBP20.93■□□□□ 0.94
CPNE1-216ENST00000437340 NPCDR1Q9BY65 106 aa20.93■□□□□ 0.94
CPNE1-216ENST00000437340 TMEM133Q9H2Q1 129 aa20.93■□□□□ 0.94
CPNE1-216ENST00000437340 ENY2Q9NPA8 101 aa20.93■□□□□ 0.94
CPNE1-216ENST00000437340 FKBP11Q9NYL4 201 aa20.93■□□□□ 0.94
CPNE1-216ENST00000437340 SRRM4A7MD48 611 aaKnown RBP20.92■□□□□ 0.94
CPNE1-216ENST00000437340 C17orf112F2Z3M2 114 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 CD1BP29016 333 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 ZNF726P1Q15940 193 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 ABHD12Q8N2K0 398 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 ZNF709Q8N972 641 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 RARRES2Q99969 163 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 PCGF1Q9BSM1 259 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 MIOXQ9UGB7 285 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 WDR83OSQ9Y284 106 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 OR51B2Q9Y5P1 312 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 PRSS46E5RG02 174 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 NUPL2O15504 423 aaKnown RBP20.92■□□□□ 0.94
CPNE1-216ENST00000437340 RBP4P02753 201 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 IL3RAP26951 378 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 RPS16P62249 146 aaKnown RBP20.92■□□□□ 0.94
CPNE1-216ENST00000437340 DLK1P80370 383 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 PDPNQ86YL7 162 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 NABP2Q9BQ15 211 aa20.92■□□□□ 0.94
CPNE1-216ENST00000437340 UNKLQ9H9P5 680 aaKnown RBP20.92■□□□□ 0.94
CPNE1-216ENST00000437340 RRHO14718 337 aa20.91■□□□□ 0.94
CPNE1-216ENST00000437340 MPDU1O75352 247 aa20.91■□□□□ 0.94
CPNE1-216ENST00000437340 KBTBD11O94819 623 aa20.91■□□□□ 0.94
CPNE1-216ENST00000437340 HSPB1P04792 205 aaKnown RBP20.91■□□□□ 0.94
CPNE1-216ENST00000437340 ELLP55199 621 aaPredicted RBP20.91■□□□□ 0.94
CPNE1-216ENST00000437340 KHDC3LQ587J8 217 aa20.91■□□□□ 0.94
CPNE1-216ENST00000437340 ZNF787Q6DD87 383 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms